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| IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1 |
| Package 75/247 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
flowCore1.2.0Nolwenn Le MeurLast Changed Date: 2007-08-19 14:03:48 -0700 Last Changed Rev: 26510 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | WARNINGS | |
| wellington | Linux (SUSE 9.2) | i686 | OK | WARNINGS | ||
| liverpool | Windows Server 2003 R2 (32-bit) | x64 | OK | WARNINGS | OK | |
| pitt | Mac OS X (10.4.10) | i386 | OK | WARNINGS | [ OK ] |
| Package: flowCore |
| Version: 1.2.0 |
| Command: /Users/biocbuild/BBS/utils/build-universal.sh flowCore_1.2.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R flowCore.buildbin-libdir |
| RetCode: 0 |
| Time: 17.8 seconds |
| Status: OK |
| PackageFile: flowCore_1.2.0.tgz |
INSTALLATION WITH 'R CMD INSTALL flowCore_1.2.0.tar.gz'
* Installing to library 'flowCore.buildbin-libdir'
* Installing *source* package 'flowCore' ...
** libs
** arch - i386
gcc-4.0 -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -msse3 -D__NO_MATH_INLINES -fPIC -g -O2 -Wall -std=gnu99 -march=nocona -c biexponential.c -o biexponential.o
gcc-4.0 -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -msse3 -D__NO_MATH_INLINES -fPIC -g -O2 -Wall -std=gnu99 -march=nocona -c inPolygon.c -o inPolygon.o
gcc-4.0 -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -dynamiclib -Wl,-macosx_version_min -Wl,10.3 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o flowCore.so biexponential.o inPolygon.o -F/Library/Frameworks/R.framework/.. -framework R
** arch - ppc
gcc-4.0 -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -fPIC -g -O2 -Wall -c biexponential.c -o biexponential.o
gcc-4.0 -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -fPIC -g -O2 -Wall -c inPolygon.c -o inPolygon.o
gcc-4.0 -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -dynamiclib -Wl,-macosx_version_min -Wl,10.3 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o flowCore.so biexponential.o inPolygon.o -F/Library/Frameworks/R.framework/.. -framework R
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: rrcov
Scalable Robust Estimators with High Breakdown Point (version 0.3-06)
KernSmooth 2.22 installed
Copyright M. P. Wand 1997
Warning: argument in method definition changed from (e1) to (x)
Creating a new generic function for "colnames" in "flowCore"
Creating a new generic function for "colnames<-" in "flowCore"
Creating a new generic function for "nrow" in "flowCore"
Creating a new generic function for "ncol" in "flowCore"
** help
>>> Building/Updating help pages for package 'flowCore'
Formats: text html latex example
GvHD text html latex
KmeansFilter text html latex example
Subset-methods text html latex example
arcsinhTransform text html latex example
biexponentialTransform text html latex example
coerce text html latex example
compensate text html latex example
each_col text html latex example
ellipsoidGate text html latex example
filter-and-methods text html latex
filter-class text html latex
filter-in-methods text html latex example
filter-on-methods text html latex example
filter text html latex example
filterDetails-methods text html latex
filterResult-class text html latex example
flowFrame-class text html latex
flowSet-class text html latex example
fsApply text html latex example
identifier text html latex example
keyword-methods text html latex example
linearTransform text html latex example
lnTransform text html latex example
logTransform text html latex example
logicalFilterResult-class text html latex example
logicleTransform text html latex example
multiFilter-class text html latex example
multipleFilterResult-class text html latex example
norm2Filter-class text html latex example
parameters text html latex example
print.filterSummary text html latex example
quadraticTransform text html latex example
randomFilterResult-class text html latex example
read.FCS text html latex example
read.FCSheader text html latex example
read.flowSet text html latex example
rectangleGate text html latex example
sampleFilter-class text html latex example
scaleTransform text html latex example
setOperationFilter-class text html latex example
spillover-flowSet text html latex
splitScaleTransform text html latex example
transform-class text html latex example
transformFilter-class text html latex example
transformList-class text html latex example
transformMap-class text html latex example
truncateTransform text html latex example
** building package indices ...
* DONE (flowCore)