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IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1
Package 69/247HostnameOSArchBUILDCHECKBUILD BIN

exonmap

1.1.15

Michal Okoniewski
Last Changed Date: 2007-08-22 05:18:41 -0700
Last Changed Rev: 26583
lamb1 Linux (SUSE 10.1) x86_64  OK  OK 
wellington Linux (SUSE 9.2) i686  OK  ERROR 
liverpool Windows Server 2003 R2 (32-bit) x64  OK  ERROR [ ERROR ]
pitt Mac OS X (10.4.10) i386  OK  OK  OK 
Package: exonmap
Version: 1.1.15
Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD INSTALL --build --library=exonmap.buildbin-libdir exonmap_1.1.15.tar.gz
RetCode: 1
Time: 21.0 seconds
Status: ERROR
PackageFile: None

Command output

installing R.css in E:/biocbld/bbs-2.1-bioc/meat/exonmap.buildbin-libdir

Using auto-selected zip options ' exonmap-HELP=ziponly'

---------- Making package exonmap ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'exonmap'
     Formats: text html latex example chm 
  PC-class                          text    html    latex   example chm
  Splanova-class                    text    html    latex   example chm
  X.toY                             text    html    latex   example chm
  array.subset                      text    html    latex   example chm
  gene.details                      text    html    latex   example chm
  gene.legend                       text    html    latex   example chm
  gene.strip                        text    html    latex   example chm
  gene.to.exon.probeset             text    html    latex   example chm
  group.indices                     text    html    latex   example chm
  pc                                text    html    latex   example chm
  plot.gene                         text    html    latex   example chm
  plot.gene.graph                   text    html    latex   example chm
  probeset.stats                    text    html    latex   example chm
  probesets.in.range                text    html    latex   example chm
  read.exon                         text    html    latex   example chm
  select.probewise                  text    html    latex   example chm
  splanova                          text    html    latex   example chm
  splicing.index                    text    html    latex   example chm
  x.rma                             text    html    latex           chm
  xmapDatabase                      text    html    latex   example chm
  xmapGene                          text    html    latex   example chm
  zipping help files
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.1-bioc\meat\R.INSTALL.4712\exonmap\chm\exonmap.chm





Compile time: 0 minutes, 0 seconds

22	Topics

102	Local links

18	Internet links

1	Graphic





Created e:\biocbld\bbs-2.1-bioc\meat\R.INSTALL.4712\exonmap\chm\exonmap.chm, 45,506 bytes

Compression decreased file by 47,015 bytes.

  preparing package exonmap for lazy loading
Loading required package: affy
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affyio
Loading required package: preprocessCore
Loading required package: simpleaffy
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
Loading required package: gcrma
Loading required package: matchprobes
Loading required package: RColorBrewer
Error: package 'RMySQL' required by 'exonmap' could not be found
Execution halted
make: *** [lazyload] Error 1
*** Installation of exonmap failed ***

Removing 'E:/biocbld/bbs-2.1-bioc/meat/exonmap.buildbin-libdir/exonmap'