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IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1
Package 37/247HostnameOSArchBUILDCHECKBUILD BIN

biomaRt

1.11.4

Steffen Durinck
Last Changed Date: 2007-07-13 09:26:48 -0700
Last Changed Rev: 25800
lamb1 Linux (SUSE 10.1) x86_64  OK  WARNINGS 
wellington Linux (SUSE 9.2) i686  OK  WARNINGS 
liverpool Windows Server 2003 R2 (32-bit) x64  OK  WARNINGS [ OK ]
pitt Mac OS X (10.4.10) i386  OK  WARNINGS  OK 
Package: biomaRt
Version: 1.11.4
Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD INSTALL --build --library=biomaRt.buildbin-libdir biomaRt_1.11.4.tar.gz
RetCode: 0
Time: 19.7 seconds
Status: OK
PackageFile: biomaRt_1.11.4.zip

Command output

installing R.css in E:/biocbld/bbs-2.1-bioc/meat/biomaRt.buildbin-libdir

Using auto-selected zip options ' biomaRt-HELP=ziponly'

---------- Making package biomaRt ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  preparing package biomaRt for lazy loading
Loading required package: XML
Loading required package: RCurl
  installing man source files
  installing indices
  installing help
Note: unmatched right brace in 'getGene' on or after line 33
Note: unmatched right brace in 'getGene.Rd' on or after line 33
Note: unmatched right brace in 'getHomolog' on or after line 44
Note: unmatched right brace in 'getHomolog.Rd' on or after line 44
 >>> Building/Updating help pages for package 'biomaRt'
     Formats: text html latex example chm 
  Mart-class                        text    html    latex           chm
  attributeSummary                  text    html    latex   example chm
  exportFASTA                       text    html    latex   example chm
  filterOptions                     text    html    latex   example chm
  filterSummary                     text    html    latex   example chm
  filterType                        text    html    latex   example chm
  getAffyArrays                     text    html    latex   example chm
  getBM                             text    html    latex   example chm
  getFeature                        text    html    latex   example chm
  getGO                             text    html    latex   example chm
  getGene                           text    html    latex   example chm
  getHomolog                        text    html    latex   example chm
  getLDS                            text    html    latex   example chm
  getSNP                            text    html    latex   example chm
  getSequence                       text    html    latex   example chm
  listAttributes                    text    html    latex   example chm
  listDatasets                      text    html    latex   example chm
  listFilters                       text    html    latex   example chm
  listMarts                         text    html    latex   example chm
  martDisconnect                    text    html    latex   example chm
  parseAttributes                   text    html    latex           chm
  parseFilters                      text    html    latex           chm
  useDataset                        text    html    latex   example chm
  useMart                           text    html    latex   example chm
  zipping help files
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.1-bioc\meat\R.INSTALL.4788\biomaRt\chm\biomaRt.chm





Compile time: 0 minutes, 0 seconds

25	Topics

48	Local links

7	Internet links

1	Graphic





Created e:\biocbld\bbs-2.1-bioc\meat\R.INSTALL.4788\biomaRt\chm\biomaRt.chm, 34,954 bytes

Compression decreased file by 31,316 bytes.

  adding MD5 sums

packaged installation of package 'biomaRt' as biomaRt_1.11.4.zip
* DONE (biomaRt)