BioC 2.1: CHECK report for GlobalAncova on lamb1

* checking for working latex ... OK
* using log directory '/home/biocbuild/bbs-2.1-bioc/meat/GlobalAncova.Rcheck'
* using R version 2.6.0 Under development (unstable) (2007-08-06 r42439)
* checking for file 'GlobalAncova/DESCRIPTION' ... OK
* this is package 'GlobalAncova' version '3.3.1'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'GlobalAncova' can be installed ... WARNING
Found the following significant warnings:
  Warning: Multiple methods lists found for 'combine'
See '/home/biocbuild/bbs-2.1-bioc/meat/GlobalAncova.Rcheck/00install.out' for details.
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating GlobalAncova-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating GlobalAncova-manual.tex ... OK
* checking GlobalAncova-manual.tex ... OK

WARNING: There was 1 warning, see
  /home/biocbuild/bbs-2.1-bioc/meat/GlobalAncova.Rcheck/00check.log
for details

* Installing *source* package 'GlobalAncova' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: corpcor
Loading required package: globaltest
Loading required package: multtest
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: survival
Loading required package: splines
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: annotate
Warning: Multiple methods lists found for 'combine'
** help
 >>> Building/Updating help pages for package 'GlobalAncova'
     Formats: text html latex example 
  GAGO                              text    html    latex   example
  GlobalAncova-methods              text    html    latex
  GlobalAncova                      text    html    latex   example
  GlobalAncova.closed-methods       text    html    latex
  GlobalAncova.closed               text    html    latex
  GlobalAncova.decomp               text    html    latex   example
  Plot.all                          text    html    latex   example
  Plot.genes-methods                text    html    latex
  Plot.genes                        text    html    latex   example
  Plot.sequential                   text    html    latex   example
  Plot.subjects-methods             text    html    latex
  Plot.subjects                     text    html    latex   example
  colon.normal                      text    html    latex   example
  colon.pheno                       text    html    latex   example
  colon.tumour                      text    html    latex   example
  pair.compare                      text    html    latex   example
  pathways                          text    html    latex   example
  phenodata                         text    html    latex   example
  vantVeer                          text    html    latex   example
** building package indices ...
* DONE (GlobalAncova)

Package 98/247	Hostname	OS	Arch	BUILD	CHECK	BUILD BIN
GlobalAncova 3.3.1 R. Meister Last Changed Date: 2007-07-13 05:22:47 -0700 Last Changed Rev: 25796	lamb1	Linux (SUSE 10.1)	x86_64	OK	[ WARNINGS ]
	wellington	Linux (SUSE 9.2)	i686	OK	WARNINGS
	liverpool	Windows Server 2003 R2 (32-bit)	x64	OK	WARNINGS	OK
	pitt	Mac OS X (10.4.10)	i386	OK	WARNINGS	OK

GlobalAncova

3.3.1

Command output