Package: tkWidgets

Version: 1.15.0

Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD check tkWidgets_1.15.0.tar.gz

RetCode: 0

Time: 26.6 seconds

Status: WARNINGS

CheckDir: tkWidgets.Rcheck

Warnings: 1

* checking for working latex ... OK
* using log directory '/home/biocbuild/bbs-2.1-bioc/meat/tkWidgets.Rcheck'
* using R version 2.6.0 Under development (unstable) (2007-05-03 r41426)
* checking for file 'tkWidgets/DESCRIPTION' ... OK
* this is package 'tkWidgets' version '1.15.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'tkWidgets' can be installed ... WARNING
Found the following significant warnings:
  Warning: unmatched brace ('}') in 'listSelect.Rd' on or after line 60
  Warning: unmatched brace ('}') in 'listSelect.Rd' on or after line 60
  Warning: unmatched brace ('}') in 'listSelect.Rd' on or after line 60
  Warning: unmatched brace ('}') in 'listSelect.Rd' on or after line 60
  Warning: unmatched brace ('}') in 'pickFiles.Rd' on or after line 32
  Warning: unmatched brace ('}') in 'pickFiles.Rd' on or after line 32
  Warning: unmatched brace ('}') in 'pickFiles.Rd' on or after line 32
  Warning: unmatched brace ('}') in 'pickFiles.Rd' on or after line 32
  Warning: unmatched brace ('}') in 'pickObjs.Rd' on or after line 28
  Warning: unmatched brace ('}') in 'pickObjs.Rd' on or after line 28
  Warning: unmatched brace ('}') in 'pickObjs.Rd' on or after line 28
  Warning: unmatched brace ('}') in 'pickObjs.Rd' on or after line 28
  Warning: unmatched brace ('}') in 'tkSampleNames.Rd' on or after line 9
  Warning: unmatched brace ('}') in 'tkSampleNames.Rd' on or after line 9
  Warning: unmatched brace ('}') in 'tkSampleNames.Rd' on or after line 9
  Warning: unmatched brace ('}') in 'tkSampleNames.Rd' on or after line 9
  Warning: unmatched brace ('}') in 'widgetRender.Rd' on or after line 46
  Warning: unmatched brace ('}') in 'widgetRender.Rd' on or after line 46
  Warning: unmatched brace ('}') in 'widgetRender.Rd' on or after line 46
  Warning: unmatched brace ('}') in 'widgetRender.Rd' on or after line 46
See '/home/biocbuild/bbs-2.1-bioc/meat/tkWidgets.Rcheck/00install.out' for details.
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
eExplorer : codeChanged: no visible binding for '<<-' assignment to
  'newCode'
fileWizard : showMore: no visible binding for global variable
  'restList'
fileWizard : argSelected: no visible binding for '<<-' assignment to
  'selectedArg'
fileWizard : argSelected: no visible binding for global variable
  'restList'
fileWizard : argSelected: no visible binding for global variable
  'restList'
fileWizard : argSelected: no visible binding for global variable
  'restEntry'
fileWizard : argSelected: no visible binding for global variable
  'selectedArg'
fileWizard : argSelected: no visible binding for global variable
  'restUp'
getPDFromFile: no visible global function definition for
  'getNameWidget'
getPDFromFile: no visible global function definition for
  'readFileByUserArgs'
importPhenoData : getPData: no visible global function definition for
  'pData'
.onLoad: no visible global function definition for 'addVigs2WinMenu'
pExplorer : browse: no visible binding for '<<-' assignment to 'subDir'
procPDF: no visible global function definition for 'shell.exec'
tkphenoData : <anonymous>: no visible binding for global variable
  'cov.name.label'
tkphenoData : <anonymous>: no visible binding for global variable
  'desc.lst'
vExplorer : write2VigList: no visible global function definition for
  'pkgVignettes'
viewVignette : back: no visible binding for global variable
  'backButton'
viewVignette : viewPDF: no visible global function definition for
  'tkMessageBox'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating tkWidgets-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating tkWidgets-manual.tex ... OK
* checking tkWidgets-manual.tex ... OK

WARNING: There was 1 warning, see
  /home/biocbuild/bbs-2.1-bioc/meat/tkWidgets.Rcheck/00check.log
for details

* Installing *source* package 'tkWidgets' ...
** R
** inst
** preparing package for lazy loading
Loading required package: widgetTools
Loading required package: tcltk
Loading Tcl/Tk interface ... done
Loading required package: DynDoc
** help
Warning: unmatched brace ('}') in 'listSelect.Rd' on or after line 60
Warning: unmatched brace ('}') in 'listSelect.Rd' on or after line 60
Warning: unmatched brace ('}') in 'listSelect.Rd' on or after line 60
Warning: unmatched brace ('}') in 'listSelect.Rd' on or after line 60
Warning: unmatched brace ('}') in 'pickFiles.Rd' on or after line 32
Warning: unmatched brace ('}') in 'pickFiles.Rd' on or after line 32
Warning: unmatched brace ('}') in 'pickFiles.Rd' on or after line 32
Warning: unmatched brace ('}') in 'pickFiles.Rd' on or after line 32
Warning: unmatched brace ('}') in 'pickObjs.Rd' on or after line 28
Warning: unmatched brace ('}') in 'pickObjs.Rd' on or after line 28
Warning: unmatched brace ('}') in 'pickObjs.Rd' on or after line 28
Warning: unmatched brace ('}') in 'pickObjs.Rd' on or after line 28
Warning: unmatched brace ('}') in 'tkSampleNames.Rd' on or after line 9
Warning: unmatched brace ('}') in 'tkSampleNames.Rd' on or after line 9
Warning: unmatched brace ('}') in 'tkSampleNames.Rd' on or after line 9
Warning: unmatched brace ('}') in 'tkSampleNames.Rd' on or after line 9
Warning: unmatched brace ('}') in 'widgetRender.Rd' on or after line 46
Warning: unmatched brace ('}') in 'widgetRender.Rd' on or after line 46
Warning: unmatched brace ('}') in 'widgetRender.Rd' on or after line 46
Warning: unmatched brace ('}') in 'widgetRender.Rd' on or after line 46
 >>> Building/Updating help pages for package 'tkWidgets'
     Formats: text html latex example 
  DPExplorer                        text    html    latex   example
  WName                             text    html    latex   example
  appendSepDir                      text    html    latex   example
  args2XML                          text    html    latex   example
  argsWidget                        text    html    latex   example
  colInfo-class                     text    html    latex   example
  dataViewer                        text    html    latex   example
  dbArgsWidget                      text    html    latex   example
  eExplorer                         text    html    latex   example
  fileBrowser                       text    html    latex   example
  fileWizard                        text    html    latex   example
  getLightTW                        text    html    latex   example
  getWvalues                        text    html    latex   example
  guess.sep                         text    html    latex   example
  hasChar                           text    html    latex   example
  importPhenoData                   text    html    latex   example
  importWizard                      text    html    latex   example
  listSelect                        text    html    latex   example
  objNameToList                     text    html    latex   example
  objViewer                         text    html    latex   example
  objectBrowser                     text    html    latex   example
  pExplorer                         text    html    latex   example
  pickFiles                         text    html    latex   example
  pickItems                         text    html    latex   example
  pickObjs                          text    html    latex   example
  setArgsList                       text    html    latex   example
  stdType                           text    html    latex   example
  tkMIAME                           text    html    latex
  tkSampleNames                     text    html    latex
  tkphenoData                       text    html    latex
  vExplorer                         text    html    latex   example
  values.Widget                     text    html    latex   example
  widgetRender                      text    html    latex   example
** building package indices ...
* DONE (tkWidgets)