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OrderedList

1.9.0

Claudio Lottaz
Last Changed Date: 2007-05-11 21:56:41 -0700
Last Changed Rev: 24616
lamb1 Linux (SUSE 10.1) x86_64 [ ERROR ]skipped
wellington Linux (SUSE 9.2) i686  ERROR skipped
churchill Solaris 2.9 sparc  ERROR skipped
lemming Windows Server 2003 (32-bit) x64  ERROR skippedskipped
Package: OrderedList
Version: 1.9.0
Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD build OrderedList
RetCode: 1
Time: 6.5 seconds
Status: ERROR
PackageFile: None

Command output

* checking for file 'OrderedList/DESCRIPTION' ... OK
* preparing 'OrderedList':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'OrderedList' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: twilight
Loading required package: splines
** help
 >>> Building/Updating help pages for package 'OrderedList'
     Formats: text html latex example 
  OL.data                           text    html    latex
  OL.result                         text    html    latex   example
  OrderedList                       text    html    latex   example
  check.test.args                   text    html    latex
  compareLists                      text    html    latex   example
  getOverlap                        text    html    latex   example
  overlap                           text    html    latex
  plot.OrderedList                  text    html    latex   example
  prepareData                       text    html    latex   example
  preparePermutations               text    html    latex
  print.OrderedList                 text    html    latex   example
  scoreOrderComparison              text    html    latex
  scoreRankings                     text    html    latex
  shuffledRandomScores              text    html    latex
** building package indices ...
* DONE (OrderedList)
* creating vignettes ... ERROR

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: splines

Error: processing vignette 'tr_2006_01.Rnw' failed with diagnostics:
 chunk 4 
Error in check.test.args(m, cl, paired) : Groups must have same size in paired test, recieved 8 1 samples and 13 0 samples instead
In addition: There were 50 or more warnings (use warnings() to see the first 50)
Execution halted