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webbioc

1.9.0

Colin A. Smith
Last Changed Date: 2007-04-24 11:31:42 -0700
Last Changed Rev: 24217
lamb1 Linux (SUSE 10.1) x86_64  OK  OK 
wellington Linux (SUSE 9.2) i686  OK  OK 
churchill Solaris 2.9 sparc  OK  OK 
lemming Windows Server 2003 (32-bit) x64  OK [ OK ] OK 
Package: webbioc
Version: 1.9.0
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check webbioc_1.9.0.tar.gz
RetCode: 0
Time: 87.7 seconds
Status: OK
CheckDir: webbioc.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory 'D:/biocbld/bbs-2.1-bioc/meat/webbioc.Rcheck'
* using R version 2.6.0 Under development (unstable) (2007-04-17 r41210)
* checking for file 'webbioc/DESCRIPTION' ... OK
* this is package 'webbioc' version '1.9.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'webbioc' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating webbioc-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating webbioc-manual.tex ... OK
* checking webbioc-manual.tex ... OK

webbioc.Rcheck/00install.out:

installing R.css in D:/biocbld/bbs-2.1-bioc/meat/webbioc.Rcheck


---------- Making package webbioc ------------
  adding build stamp to DESCRIPTION
  installing R files
  save image
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affy
Loading required package: affyio
Loading required package: multtest
Loading required package: survival
Loading required package: splines
Loading required package: annaffy
Loading required package: GO
Loading required package: KEGG
Loading required package: vsn
Loading required package: limma
Loading required package: gcrma
Loading required package: matchprobes
Loading required package: qvalue
  installing inst files
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'webbioc'
     Formats: text html latex example chm 
  installReps                       text    html    latex           chm
  mt.wrapper                        text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\bbs-2.1-bioc\meat\webbioc.Rcheck\00_pkg_src\webbioc\chm\webbioc.chm


Compile time: 0 minutes, 0 seconds
3	Topics
4	Local links
0	Internet links
1	Graphic


Created d:\biocbld\bbs-2.1-bioc\meat\webbioc.Rcheck\00_pkg_src\webbioc\chm\webbioc.chm, 20,048 bytes
Compression increased file by 6,674 bytes.
  adding MD5 sums

* DONE (webbioc)