Package: rHVDM

Version: 1.3.0

Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD check rHVDM_1.3.0.tar.gz

RetCode: 0

Time: 372.1 seconds

Status: OK

CheckDir: rHVDM.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory '/extra/loc/biocbuild/bbs-2.1-bioc/meat/rHVDM.Rcheck'
* using R version 2.6.0 Under development (unstable) (2007-04-17 r41210)
* checking for file 'rHVDM/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'rHVDM' version '1.3.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'rHVDM' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating rHVDM-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating rHVDM-manual.tex ... OK
* checking rHVDM-manual.tex ... OK

* Installing *source* package 'rHVDM' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: R2HTML
Loading required package: affy
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affyio
Loading required package: minpack.lm
** help
 >>> Building/Updating help pages for package 'rHVDM'
     Formats: text html latex example 
  HVDMcheck                         text    html    latex   example
  HVDMreport                        text    html    latex   example
  fitgene                           text    html    latex   example
  fiveGyMAS5                        text    html    latex
  genestoscreen                     text    html    latex
  p53traingenes                     text    html    latex
  screening                         text    html    latex   example
  training                          text    html    latex   example
** building package indices ...
* DONE (rHVDM)