Package: MiPP

Version: 1.9.0

Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD check MiPP_1.9.0.tar.gz

RetCode: 0

Time: 472.6 seconds

Status: OK

CheckDir: MiPP.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory '/extra/loc/biocbuild/bbs-2.1-bioc/meat/MiPP.Rcheck'
* using R version 2.6.0 Under development (unstable) (2007-04-17 r41210)
* checking for file 'MiPP/DESCRIPTION' ... OK
* this is package 'MiPP' version '1.9.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'MiPP' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating MiPP-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating MiPP-manual.tex ... OK
* checking MiPP-manual.tex ... OK

* Installing *source* package 'MiPP' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: e1071
Loading required package: class
Loading required package: MASS
** help
 >>> Building/Updating help pages for package 'MiPP'
     Formats: text html latex example 
  colon                             text    html    latex
  cv.mipp.rule                      text    html    latex
  get.mipp                          text    html    latex
  get.mipp.lda                      text    html    latex
  get.mipp.logistic                 text    html    latex
  get.mipp.qda                      text    html    latex
  get.mipp.svm.linear               text    html    latex
  get.mipp.svm.rbf                  text    html    latex
  leuk1                             text    html    latex
  leuk2                             text    html    latex
  leukemia                          text    html    latex
  linearkernel.decision.function    text    html    latex
  mipp                              text    html    latex   example
  mipp.preproc                      text    html    latex   example
  mipp.rule                         text    html    latex
  mipp.seq                          text    html    latex   example
  pre.select                        text    html    latex
  quant.normal                      text    html    latex
  quant.normal2                     text    html    latex
  rbfkernel.decision.function       text    html    latex
** building package indices ...
* DONE (MiPP)