Back to the "Multiple platform build/check report"
Package 90/234 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
GGtools1.5.0Vince CareyLast Changed Date: 2007-04-26 11:59:29 -0700 Last Changed Rev: 24316 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | [ OK ] | |
wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
churchill | Solaris 2.9 | sparc | OK | OK | ||
lemming | Windows Server 2003 (32-bit) | x64 | OK | ERROR | OK |
Package: GGtools |
Version: 1.5.0 |
Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD check GGtools_1.5.0.tar.gz |
RetCode: 0 |
Time: 165.9 seconds |
Status: OK |
CheckDir: GGtools.Rcheck |
Warnings: 0 |
* checking for working latex ... OK * using log directory '/home/biocbuild/bbs-2.1-bioc/meat/GGtools.Rcheck' * using R version 2.6.0 Under development (unstable) (2007-04-17 r41210) * checking for file 'GGtools/DESCRIPTION' ... OK * this is package 'GGtools' version '1.5.0' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'GGtools' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * checking for CRLF line endings in C/C++/Fortran sources/headers ... OK * checking for portable use of $BLAS_LIBS ... OK * creating GGtools-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating GGtools-manual.tex ... OK * checking GGtools-manual.tex ... OK
GGtools.Rcheck/00install.out:
* Installing *source* package 'GGtools' ... ** libs g++ -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c minfra.cc -o minfra.o minfra.cc: In function 'matrix operator/(matrix&, matrix&)': minfra.cc:459: warning: unused variable 'a2c' minfra.cc: In function 'matrix delete_col(matrix, int)': minfra.cc:545: warning: unused variable 'ncop' minfra.cc:545: warning: unused variable 'nresel' minfra.cc:545: warning: unused variable 'skip' minfra.cc:546: warning: unused variable 'resbase' minfra.cc:546: warning: unused variable 'Xbase' minfra.cc: In function 'int split(matrix&, matrix&, matrix*)': minfra.cc:1210: warning: unused variable 'j' minfra.cc: In function 'matrix* split(matrix&, matrix&)': minfra.cc:1245: warning: unused variable 'j' g++ -shared -L/usr/local/lib64 -o GGtools.so minfra.o -L/home/biocbuild/bbs-2.1-bioc/R/lib -lR ** R ** data ** inst ** preparing package for lazy loading Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. Loading required package: hgfocus Loading required package: geneplotter Loading required package: annotate Loading required package: lattice KernSmooth 2.22 installed Copyright M. P. Wand 1997 Loading required package: mgu74av2 Creating a new generic function for "nrow" in "GGtools" ** help >>> Building/Updating help pages for package 'GGtools' Formats: text html latex example HM2rac text html latex example HMworkflow text html latex example Strains2rac text html latex example geneLocs text html latex example genoStrings text html latex example make_racExSet text html latex example oGtypeExSet-class text html latex example plot_EvG text html latex example racExSet-class text html latex example snpMeta-class text html latex example snpScreen text html latex example snps text html latex example ** building package indices ... Loading required package: methods * DONE (GGtools)