Package: ACME

Version: 1.3.0

Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD build ACME

RetCode: 0

Time: 40.2 seconds

Status: OK

PackageFile: ACME_1.3.0.tar.gz

* checking for file 'ACME/DESCRIPTION' ... OK
* preparing 'ACME':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'ACME' ...
** libs
gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include  -I/usr/local/include    -fPIC  -g -O2 -Wall -c windowChisq.c -o windowChisq.o
windowChisq.c: In function 'windowChisq':
windowChisq.c:58: warning: suggest parentheses around comparison in operand of &
windowChisq.c:63: warning: suggest parentheses around comparison in operand of &
windowChisq.c:21: warning: unused variable 'xa'
windowChisq.c: At top level:
windowChisq.c:86: warning: initialization from incompatible pointer type
gcc -std=gnu99 -G -L/usr/local/lib -o ACME.so windowChisq.o   -L/loc/biocbuild/bbs-2.1-bioc/R/lib -lR
** R
** data
** inst
** help
 >>> Building/Updating help pages for package 'ACME'
     Formats: text html latex example 
  aGFF-class                        text    html    latex   example
  aGFFCalc-class                    text    html    latex   example
  do.aGFF.calc                      text    html    latex   example
  example.agff                      text    html    latex   example
  findClosestGene                   text    html    latex   example
  findRegions                       text    html    latex   example
  getRefflat                        text    html    latex   example
  read.resultsGFF                   text    html    latex   example
  write.sgr                         text    html    latex   example
** building package indices ...
* DONE (ACME)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source files
* checking for empty or unneeded directories
* building 'ACME_1.3.0.tar.gz'