Package: oneChannelGUI

Version: 1.2.20

Command: /loc/biocbuild/bbs-2.0-bioc/R/bin/R CMD check oneChannelGUI_1.2.20.tar.gz

RetCode: 0

Time: 183.6 seconds

Status: WARNINGS

CheckDir: oneChannelGUI.Rcheck

Warnings: 1

* checking for working latex ... OK
* using log directory '/extra/loc/biocbuild/bbs-2.0-bioc/meat/oneChannelGUI.Rcheck'
* using R version 2.5.1 (2007-06-27)
* checking for file 'oneChannelGUI/DESCRIPTION' ... OK
* this is package 'oneChannelGUI' version '1.2.20'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'oneChannelGUI' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... WARNING
Undocumented code objects:
  metaArrayIC metaArrayMerge
All user-level objects in a package should have documentation entries.
See the chapter 'Writing R documentation files' in manual 'Writing R
Extensions'.
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating oneChannelGUI-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating oneChannelGUI-manual.tex ... OK
* checking oneChannelGUI-manual.tex ... OK

WARNING: There was 1 warning, see
  /extra/loc/biocbuild/bbs-2.0-bioc/meat/oneChannelGUI.Rcheck/00check.log
for details

* Installing *source* package 'oneChannelGUI' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affylmGUI
Loading required package: limma
Loading required package: tcltk
Loading Tcl/Tk interface ... done
Loading required package: affy
Loading required package: affyio
Loading required package: tkWidgets
Loading required package: widgetTools
Loading required package: DynDoc
** help
 >>> Building/Updating help pages for package 'oneChannelGUI'
     Formats: text html latex example 
  AptMidas                          text    html    latex   example
  GOenrichment                      text    html    latex   example
  IPAlistFilter                     text    html    latex   example
  ML.edesign                        text    html    latex   example
  OpenLargefiles                    text    html    latex   example
  PlotOptionsv1                     text    html    latex   example
  RankProd                          text    html    latex   example
  VennDiagram                       text    html    latex   example
  crosshybFilter                    text    html    latex   example
  crosshybhuex10stv2na22hg18        text    html    latex
  crosshybmoex10stv1na22mm8         text    html    latex
  crosshybraex10stv1na22rn4         text    html    latex
  dfMAplot                          text    html    latex   example
  erankProdAltSpl                   text    html    latex   example
  erankProdAltSplFilterl            text    html    latex   example
  extractAffyids                    text    html    latex   example
  filteringTable                    text    html    latex   example
  geoVSbioc                         text    html    latex
  huex10stv2na22hg18                text    html    latex
  inspecting.one.splice.index       text    html    latex   example
  inspecting.splice.index           text    html    latex   example
  intensityFilter                   text    html    latex   example
  iqrFilter                         text    html    latex   example
  listFilter                        text    html    latex   example
  masigpro                          text    html    latex   example
  masigpro.edesign                  text    html    latex   example
  masigpro.view                     text    html    latex   example
  moex10stv1na22mm8                 text    html    latex
  myExpresso                        text    html    latex   example
  ocPlotHist                        text    html    latex   example
  ocPlotPCA                         text    html    latex   example
  oneChannelGUI-package             text    html    latex   example
  oneChannelGUI                     text    html    latex   example
  plierToZero                       text    html    latex   example
  plotGO                            text    html    latex   example
  raex10stv1na22rn4                 text    html    latex
  rawpCheck                         text    html    latex   example
  reviqrFilter                      text    html    latex   example
  sample.size.evaluation            text    html    latex   example
  sample.size.evaluation1           text    html    latex   example
  showDataset                       text    html    latex   example
  showTopTable                      text    html    latex   example
  siggenes                          text    html    latex   example
  simFilter                         text    html    latex   example
  spliceIndex                       text    html    latex   example
  targetWidget                      text    html    latex   example
  templA                            text    html    latex   example
  trainTest                         text    html    latex   example
** building package indices ...
* DONE (oneChannelGUI)