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ctc

1.10.0

Antoine Lucas
Last Changed Date: 2007-04-24 11:21:48 -0700
Last Changed Rev: 24214
lamb1 Linux (SUSE 10.1) x86_64  OK  OK 
wellington Linux (SUSE 9.2) i686  OK [ OK ]
lemming Windows Server 2003 (32-bit) x64  OK  OK  OK 
Package: ctc
Version: 1.10.0
Command: /loc/biocbuild/bbs-2.0-bioc/R/bin/R CMD check ctc_1.10.0.tar.gz
RetCode: 0
Time: 142.0 seconds
Status: OK
CheckDir: ctc.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory '/extra/loc/biocbuild/bbs-2.0-bioc/meat/ctc.Rcheck'
* using R version 2.5.1 (2007-06-27)
* checking for file 'ctc/DESCRIPTION' ... OK
* this is package 'ctc' version '1.10.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'ctc' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating ctc-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating ctc-manual.tex ... OK
* checking ctc-manual.tex ... OK

ctc.Rcheck/00install.out:

* Installing *source* package 'ctc' ...
** R
** demo
** exec
** inst
** help
 >>> Building/Updating help pages for package 'ctc'
     Formats: text html latex example 
  hc2Newick                         text    html    latex   example
  hclust2treeview                   text    html    latex   example
  r2cluster                         text    html    latex   example
  r2gtr                             text    html    latex   example
  r2xcluster                        text    html    latex   example
  read.eisen                        text    html    latex
  xcluster                          text    html    latex   example
  xcluster2r                        text    html    latex   example
** building package indices ...
* DONE (ctc)