Package: multtest

Version: 1.13.0

Command: E:\biocbld\2.0d\R\bin\R.exe CMD check multtest_1.13.0.tar.gz

RetCode: 1

Time: 91.5 seconds

Status: ERROR

CheckDir: multtest.Rcheck

Warnings: NA

* checking for working latex ... OK
* using log directory 'E:/biocbld/2.0d/Rpacks/multtest.Rcheck'
* using R version 2.5.0 Under development (unstable) (2006-12-05 r40126)
* checking for file 'multtest/DESCRIPTION' ... OK
* this is package 'multtest' version '1.13.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'multtest' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for non-ASCII characters ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking for CRLF line endings in C/C++/Fortran sources/headers ... OK
* checking for portable compilation flags in Makevars ... OK
* checking for portable use of $BLAS_LIBS ... OK
* creating multtest-Ex.R ... OK
* checking examples ... OK
* creating multtest-manual.tex ... OK
* checking multtest-manual.tex ... ERROR
LaTeX errors when creating DVI version.
This typically indicates Rd problems.

installing R.css in E:/biocbld/2.0d/Rpacks/multtest.Rcheck


---------- Making package multtest ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  making DLL ...
making Rpack.d from Rpack.c
making block_sampling_fixed.d from block_sampling_fixed.c
making bootloop.d from bootloop.c
making mt.d from mt.c
making pairt_sampling.d from pairt_sampling.c
making pairt_sampling_fixed.d from pairt_sampling_fixed.c
making random.d from random.c
making sampling.d from sampling.c
making sampling_fixed.d from sampling_fixed.c
making stat_func.d from stat_func.c
making stat_order.d from stat_order.c
gcc   -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99 -DUSEDOUBLE -DWINDOWS  -c Rpack.c -o Rpack.o
gcc   -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99 -DUSEDOUBLE -DWINDOWS  -c block_sampling_fixed.c -o block_sampling_fixed.o
gcc   -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99 -DUSEDOUBLE -DWINDOWS  -c bootloop.c -o bootloop.o
gcc   -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99 -DUSEDOUBLE -DWINDOWS  -c mt.c -o mt.o
gcc   -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99 -DUSEDOUBLE -DWINDOWS  -c pairt_sampling.c -o pairt_sampling.o
gcc   -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99 -DUSEDOUBLE -DWINDOWS  -c pairt_sampling_fixed.c -o pairt_sampling_fixed.o
gcc   -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99 -DUSEDOUBLE -DWINDOWS  -c random.c -o random.o
gcc   -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99 -DUSEDOUBLE -DWINDOWS  -c sampling.c -o sampling.o
gcc   -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99 -DUSEDOUBLE -DWINDOWS  -c sampling_fixed.c -o sampling_fixed.o
gcc   -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99 -DUSEDOUBLE -DWINDOWS  -c stat_func.c -o stat_func.o
gcc   -Ie:/biocbld/2.0d/R/include  -Wall -O2 -std=gnu99 -DUSEDOUBLE -DWINDOWS  -c stat_order.c -o stat_order.o
windres --include-dir e:/biocbld/2.0d/R/include  -i multtest_res.rc -o multtest_res.o
gcc  -shared -s  -o multtest.dll multtest.def Rpack.o block_sampling_fixed.o bootloop.o mt.o pairt_sampling.o pairt_sampling_fixed.o random.o sampling.o sampling_fixed.o stat_func.o stat_order.o multtest_res.o  -Le:/biocbld/2.0d/R/bin -lm   -lR
  ... DLL made
  installing DLL
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'multtest'
     Formats: text html latex example chm 
  MTP-class                         text    html    latex   example chm
  MTP-methods                       text    html    latex           chm
  MTP                               text    html    latex   example chm
  boot.resample                     text    html    latex   example chm
  fwer2gfwer                        text    html    latex   example chm
  get.index                         text    html    latex   example chm
  golub                             text    html    latex           chm
  meanX                             text    html    latex   example chm
  mt.internal                       text    html    latex           chm
  mt.maxT                           text    html    latex   example chm
  mt.plot                           text    html    latex   example chm
  mt.rawp2adjp                      text    html    latex   example chm
  mt.reject                         text    html    latex   example chm
  mt.sample.teststat                text    html    latex   example chm
  mt.teststat                       text    html    latex   example chm
  ss.maxT                           text    html    latex   example chm
  wapply                            text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\2.0d\Rpacks\multtest.Rcheck\00_pkg_src\multtest\chm\multtest.chm


Compile time: 0 minutes, 0 seconds
18	Topics
121	Local links
40	Internet links
1	Graphic


Created e:\biocbld\2.0d\Rpacks\multtest.Rcheck\00_pkg_src\multtest\chm\multtest.chm, 69,283 bytes
Compression decreased file by 69,738 bytes.
  preparing package multtest for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: survival
Loading required package: splines
Creating a new generic function for "as.list" in "multtest"
  adding MD5 sums

* DONE (multtest)