Package: applera

Version: 1.4.0

Command: D:\biocbld\1.9d\R\bin\R.exe CMD check applera_1.4.0.tar.gz

RetCode: 0

Time: 102.7 seconds

Status: OK

CheckDir: applera.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory 'D:/biocbld/1.9d/Rpacks/applera.Rcheck'
* using R version 2.4.0 (2006-10-03)
* checking for file 'applera/DESCRIPTION' ... OK
* this is package 'applera' version '1.4.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'applera' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for non-ASCII characters ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating applera-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating applera-manual.tex ... OK
* checking applera-manual.tex ... OK

installing R.css in D:/biocbld/1.9d/Rpacks/applera.Rcheck


---------- Making package applera ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'applera'
     Formats: text html latex example chm 
  CATPlots                          text    html    latex   example chm
  applera                           text    html    latex   example chm
  optFilter                         text    html    latex   example chm
  readAp                            text    html    latex   example chm
  test                              text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\1.9d\Rpacks\applera.Rcheck\00_pkg_src\applera\chm\applera.chm


Compile time: 0 minutes, 0 seconds
6	Topics
31	Local links
0	Internet links
1	Graphic


Created d:\biocbld\1.9d\Rpacks\applera.Rcheck\00_pkg_src\applera\chm\applera.chm, 25,600 bytes
Compression decreased file by 3,879 bytes.
  preparing package applera for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: affy
Loading required package: affyio
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
Loading required package: limma
Loading required package: geneplotter
Loading required package: annotate
Loading required package: RColorBrewer
Loading required package: prada
Loading required package: grid
Loading required package: combinat

Attaching package: 'combinat'


	The following object(s) are masked from package:utils :

	 combn 

  adding MD5 sums

* DONE (applera)