Package: pairseqsim

Version: 1.8.0

Command: D:\biocbld\1.9d\R\bin\R.exe CMD build pairseqsim

RetCode: 0

Time: 27.5 seconds

Status: OK

PackageFile: pairseqsim_1.8.0.tar.gz

* checking for file 'pairseqsim/DESCRIPTION' ... OK
* preparing 'pairseqsim':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* checking whether 'INDEX' is up-to-date ... NO
* use '--force' to overwrite the existing 'INDEX'
* installing the package to re-build vignettes
installing R.css in D:/biocbld/1.9d/tmpdir/Rinst288008990


---------- Making package pairseqsim ------------
  adding build stamp to DESCRIPTION
  making DLL ...
making align.d from align.c
making basic.d from basic.c
making callalign.d from callalign.c
gcc   -Id:/biocbld/1.9d/R/include  -Wall -O2 -std=gnu99   -c align.c -o align.o
gcc   -Id:/biocbld/1.9d/R/include  -Wall -O2 -std=gnu99   -c basic.c -o basic.o
gcc   -Id:/biocbld/1.9d/R/include  -Wall -O2 -std=gnu99   -c callalign.c -o callalign.o
windres --include-dir d:/biocbld/1.9d/R/include  -i pairseqsim_res.rc -o pairseqsim_res.o
gcc  -shared -s  -o pairseqsim.dll pairseqsim.def align.o basic.o callalign.o pairseqsim_res.o  -Ld:/biocbld/1.9d/R/bin   -lR
  ... DLL made
  installing DLL
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'pairseqsim'
     Formats: text html latex example chm 
  AAAlignment-class                 text    html    latex   example chm
  AAAlphabet-class                  text    html    latex   example chm
  AASequence-class                  text    html    latex   example chm
  AASequence                        text    html    latex   example chm
  AASequenceList-class              text    html    latex   example chm
  EPAM110                           text    html    latex   example chm
  Submatrix-class                   text    html    latex           chm
  listdist-methods                  text    html    latex           chm
  readFasta-methods                 text    html    latex   example chm
  salign-methods                    text    html    latex   example chm
  sequlist                          text    html    latex   example chm
  testalign-methods                 text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\1.9d\Rpacks\pairseqsim\chm\pairseqsim.chm





Compile time: 0 minutes, 0 seconds

13	Topics

129	Local links

11	Internet links

1	Graphic





Created d:\biocbld\1.9d\Rpacks\pairseqsim\chm\pairseqsim.chm, 28,423 bytes

Compression decreased file by 37,369 bytes.

  adding MD5 sums

* DONE (pairseqsim)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source files
* checking for empty or unneeded directories
* building 'pairseqsim_1.8.0.tar.gz'