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| Package 58/205 | OS | Arch | BUILD | CHECK | BUILD BIN |
externalVector1.5.0Biocore Team | Linux (SUSE 9.2) | x86_64 | OK | ERROR | |
| Linux (SUSE 9.2) | i686 | OK | [ ERROR ] | ||
| Solaris 2.9 | sparc | OK | ERROR | ||
| Linux (SUSE 10.0) | x86_64 | OK | ERROR | ||
| Windows Server 2003 | x86_64 | OK | ERROR | ERROR | |
| Windows XP | i686 | OK | ERROR | skipped | |
| Mac OS X (10.4.6) | i686 | OK | ERROR |
| Package: externalVector |
| Version: 1.5.0 |
| Command: /loc/biocbuild/1.9d/R/bin/R CMD check externalVector_1.5.0.tar.gz |
| RetCode: 1 |
| Time: 23.8 seconds |
| Status: ERROR |
| CheckDir: externalVector.Rcheck |
| Warnings: NA |
* checking for working latex ... OK * using log directory '/extra/loc/biocbuild/1.9d/Rpacks/externalVector.Rcheck' * using R version 2.4.0 alpha (2006-09-10 r39242) * checking for file 'externalVector/DESCRIPTION' ... OK * this is package 'externalVector' version '1.5.0' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'externalVector' can be installed ... ERROR Installation failed. See '/extra/loc/biocbuild/1.9d/Rpacks/externalVector.Rcheck/00install.out' for details.
externalVector.Rcheck/00install.out:
* Installing *source* package 'externalVector' ... ** libs gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fpic -g -O2 -std=gnu99 -Wall -c allocator.c -o allocator.o gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fpic -g -O2 -std=gnu99 -Wall -c arraySummary.c -o arraySummary.o gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fpic -g -O2 -std=gnu99 -Wall -c externalVector.c -o externalVector.o externalVector.c: In function `characterSubset': externalVector.c:117: warning: implicit declaration of function `CoercionWarning' externalVector.c: At top level: externalVector.c:6: warning: `ScalarVector' defined but not used gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fpic -g -O2 -std=gnu99 -Wall -c groups.c -o groups.o groups.c: In function `integerBinaryArith': groups.c:1729: warning: implicit declaration of function `CoercionWarning' gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fpic -g -O2 -std=gnu99 -Wall -c math.c -o math.o math.c: In function `externalVectorLog': math.c:313: warning: implicit declaration of function `CoercionWarning' gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fpic -g -O2 -std=gnu99 -Wall -c slice.c -o slice.o slice.c: In function `slimplifyPositiveSubscript': slice.c:289: warning: implicit declaration of function `RealFromInteger' slice.c: In function `getIndexLength': slice.c:792: warning: implicit declaration of function `IntegerFromReal' slice.c:794: warning: implicit declaration of function `CoercionWarning' gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fpic -g -O2 -std=gnu99 -Wall -c storage.c -o storage.o storage.c: In function `defaultGetLogicalFromIntegerElt': storage.c:76: warning: implicit declaration of function `LogicalFromInteger' storage.c: In function `defaultGetLogicalFromNumericElt': storage.c:86: warning: implicit declaration of function `LogicalFromReal' storage.c: In function `defaultGetLogicalFromComplexElt': storage.c:96: warning: implicit declaration of function `LogicalFromComplex' storage.c: In function `defaultGetLogicalFromCharacterElt': storage.c:106: warning: implicit declaration of function `LogicalFromString' storage.c: In function `defaultGetIntegerFromNumericElt': storage.c:135: warning: implicit declaration of function `IntegerFromReal' storage.c: In function `defaultGetIntegerFromComplexElt': storage.c:145: warning: implicit declaration of function `IntegerFromComplex' storage.c: In function `defaultGetIntegerFromCharacterElt': storage.c:155: warning: implicit declaration of function `IntegerFromString' storage.c: In function `defaultGetNumericFromLogicalElt': storage.c:175: warning: implicit declaration of function `RealFromLogical' storage.c: In function `defaultGetNumericFromIntegerElt': storage.c:185: warning: implicit declaration of function `RealFromInteger' storage.c: In function `defaultGetNumericFromComplexElt': storage.c:195: warning: implicit declaration of function `RealFromComplex' storage.c: In function `defaultGetNumericFromCharacterElt': storage.c:205: warning: implicit declaration of function `RealFromString' storage.c: In function `defaultGetComplexFromLogicalElt': storage.c:225: warning: implicit declaration of function `ComplexFromLogical' storage.c:225: error: incompatible types in assignment storage.c: In function `defaultGetComplexFromIntegerElt': storage.c:235: warning: implicit declaration of function `ComplexFromInteger' storage.c:235: error: incompatible types in assignment storage.c: In function `defaultGetComplexFromNumericElt': storage.c:245: warning: implicit declaration of function `ComplexFromReal' storage.c:245: error: incompatible types in assignment storage.c: In function `defaultGetComplexFromCharacterElt': storage.c:255: warning: implicit declaration of function `ComplexFromString' storage.c:255: error: incompatible types in assignment storage.c: In function `defaultGetCharacterFromLogicalElt': storage.c:275: warning: implicit declaration of function `StringFromLogical' storage.c:275: warning: assignment makes pointer from integer without a cast storage.c: In function `defaultGetCharacterFromIntegerElt': storage.c:285: warning: implicit declaration of function `StringFromInteger' storage.c:285: warning: assignment makes pointer from integer without a cast storage.c: In function `defaultGetCharacterFromNumericElt': storage.c:295: warning: implicit declaration of function `StringFromReal' storage.c:295: warning: assignment makes pointer from integer without a cast storage.c: In function `defaultGetCharacterFromComplexElt': storage.c:305: warning: implicit declaration of function `StringFromComplex' storage.c:305: warning: assignment makes pointer from integer without a cast storage.c: In function `defaultSetLogicalToComplexElt': storage.c:416: error: incompatible types in assignment storage.c: In function `defaultSetLogicalToCharacterElt': storage.c:427: warning: assignment makes pointer from integer without a cast storage.c: In function `defaultSetIntegerToComplexElt': storage.c:472: error: incompatible types in assignment storage.c: In function `defaultSetIntegerToCharacterElt': storage.c:483: warning: assignment makes pointer from integer without a cast storage.c: In function `defaultSetNumericToComplexElt': storage.c:528: error: incompatible types in assignment storage.c: In function `defaultSetNumericToCharacterElt': storage.c:539: warning: assignment makes pointer from integer without a cast storage.c: In function `defaultSetComplexToCharacterElt': storage.c:595: warning: assignment makes pointer from integer without a cast storage.c: In function `defaultSetCharacterToComplexElt': storage.c:651: error: incompatible types in assignment make: *** [storage.o] Error 1 ERROR: compilation failed for package 'externalVector' ** Removing '/extra/loc/biocbuild/1.9d/Rpacks/externalVector.Rcheck/externalVector'