Package: biocViews

Version: 1.1.3

Command: D:\biocbld\1.9d\R\bin\R.exe CMD check biocViews_1.1.3.tar.gz

RetCode: 0

Time: 120.2 seconds

Status: WARNINGS

CheckDir: biocViews.Rcheck

Warnings: 1

* checking for working latex ... OK
* using log directory 'D:/biocbld/1.9d/Rpacks/biocViews.Rcheck'
* using R version 2.4.0 alpha (2006-09-10 r39242)
* checking for file 'biocViews/DESCRIPTION' ... OK
* this is package 'biocViews' version '1.1.3'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'biocViews' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for non-ASCII characters ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... WARNING
Loading required package: methods

Loading required package: tools

Loading required package: graph

Loading required package: Ruuid

Error in inherits(x, "factor") : could not find function "installed.packages"
Error: .onLoad failed in 'loadNamespace' for 'Ruuid'
Error: package 'Ruuid' could not be loaded
Execution halted

It looks like this package (or one of its dependent packages) has an
unstated dependence on a standard package.  All dependencies must be
declared in DESCRIPTION.
See the information on DESCRIPTION files in the chapter 'Creating R
packages' of the 'Writing R Extensions' manual.
* checking whether the name space can be loaded with stated dependencies ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating biocViews-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating biocViews-manual.tex ... OK
* checking biocViews-manual.tex ... OK

WARNING: There was 1 warning, see
  D:/biocbld/1.9d/Rpacks/biocViews.Rcheck/00check.log
for details

installing R.css in D:/biocbld/1.9d/Rpacks/biocViews.Rcheck


---------- Making package biocViews ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'biocViews'
     Formats: text html latex example chm 
  BiocView-class                    text    html    latex           chm
  Htmlized-class                    text    html    latex           chm
  PackageDetail-class               text    html    latex   example chm
  RepositoryDetail-class            text    html    latex           chm
  biocViewsVocab                    text    html    latex   example chm
  extractVignettes                  text    html    latex           chm
  genReposControlFiles              text    html    latex           chm
  getBiocSubViews                   text    html    latex   example chm
  getBiocViews                      text    html    latex   example chm
  getPacksAndViews                  text    html    latex           chm
  getSubTerms                       text    html    latex   example chm
  htmlDoc                           text    html    latex           chm
  htmlFilename                      text    html    latex           chm
  htmlValue                         text    html    latex           chm
  writeBiocViews                    text    html    latex           chm
  writeHtmlDoc                      text    html    latex           chm
  writePackageDetailHtml            text    html    latex           chm
  writeRepositoryHtml               text    html    latex           chm
  writeTopLevelView                 text    html    latex           chm
  write_REPOSITORY                  text    html    latex           chm
  write_VIEWS                       text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\1.9d\Rpacks\biocViews.Rcheck\00_pkg_src\biocViews\chm\biocViews.chm


Compile time: 0 minutes, 0 seconds
22	Topics
101	Local links
0	Internet links
1	Graphic


Created d:\biocbld\1.9d\Rpacks\biocViews.Rcheck\00_pkg_src\biocViews\chm\biocViews.chm, 33,944 bytes
Compression decreased file by 38,734 bytes.
  preparing package biocViews for lazy loading
Loading required package: tools

Loading required package: graph

Loading required package: Ruuid

Loading required package: RBGL

Loading required package: XML


Attaching package: 'XML'


	The following object(s) are masked from package:graph :

	 addNode 

  adding MD5 sums

* DONE (biocViews)