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| Package 53/205 | OS | Arch | BUILD | CHECK | BUILD BIN |
EBImage1.3.102Oleg Sklyar | Linux (SUSE 9.2) | x86_64 | OK | [ OK ] | |
| Linux (SUSE 9.2) | i686 | OK | OK | ||
| Solaris 2.9 | sparc | OK | OK | ||
| Linux (SUSE 10.0) | x86_64 | OK | OK | ||
| Windows Server 2003 | x86_64 | ERROR | skipped | skipped | |
| Windows XP | i686 | ERROR | skipped | skipped | |
| Mac OS X (10.4.6) | i686 | ERROR | skipped |
| Package: EBImage |
| Version: 1.3.102 |
| Command: /loc/biocbuild/1.9d/R/bin/R CMD check EBImage_1.3.102.tar.gz |
| RetCode: 0 |
| Time: 147.8 seconds |
| Status: OK |
| CheckDir: EBImage.Rcheck |
| Warnings: 0 |
* checking for working latex ... OK * using log directory '/loc/biocbuild/1.9d/Rpacks/EBImage.Rcheck' * using R version 2.4.0 alpha (2006-09-10 r39242) * checking for file 'EBImage/DESCRIPTION' ... OK * this is package 'EBImage' version '1.3.102' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'EBImage' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for non-ASCII characters ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking for CRLF line endings in C/C++/Fortran sources/headers ... OK * checking for portable compilation flags in Makevars ... OK * checking for portable use of $BLAS_LIBS ... OK * creating EBImage-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating EBImage-manual.tex ... OK * checking EBImage-manual.tex ... OK
EBImage.Rcheck/00install.out:
* Installing *source* package 'EBImage' ...
checking for Magick++-config... yes
ImageMagick version 6.0.7 found
checking for Magick++-config... yes
ImageMagick++ includes located in -I/usr/include
R found in: /loc/biocbuild/1.9d/R
configure: creating ./config.status
config.status: creating src/Makevars
** libs
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/include -O2 -fmessage-length=0 -Wall -pthread -fpic -g -O2 -Wall -c alg_watershed.cpp -o alg_watershed.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/include -O2 -fmessage-length=0 -Wall -pthread -fpic -g -O2 -Wall -c colors.cpp -o colors.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/include -O2 -fmessage-length=0 -Wall -pthread -fpic -g -O2 -Wall -c common.cpp -o common.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/include -O2 -fmessage-length=0 -Wall -pthread -fpic -g -O2 -Wall -c conversions.cpp -o conversions.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/include -O2 -fmessage-length=0 -Wall -pthread -fpic -g -O2 -Wall -c display.cpp -o display.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/include -O2 -fmessage-length=0 -Wall -pthread -fpic -g -O2 -Wall -c drawables.cpp -o drawables.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/include -O2 -fmessage-length=0 -Wall -pthread -fpic -g -O2 -Wall -c flt_distmap.cpp -o flt_distmap.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/include -O2 -fmessage-length=0 -Wall -pthread -fpic -g -O2 -Wall -c flt_magick.cpp -o flt_magick.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/include -O2 -fmessage-length=0 -Wall -pthread -fpic -g -O2 -Wall -c flt_morph.cpp -o flt_morph.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/include -O2 -fmessage-length=0 -Wall -pthread -fpic -g -O2 -Wall -c flt_normalize.cpp -o flt_normalize.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/include -O2 -fmessage-length=0 -Wall -pthread -fpic -g -O2 -Wall -c flt_thresh.cpp -o flt_thresh.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/include -O2 -fmessage-length=0 -Wall -pthread -fpic -g -O2 -Wall -c indexing.cpp -o indexing.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/include -O2 -fmessage-length=0 -Wall -pthread -fpic -g -O2 -Wall -c io.cpp -o io.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/include -O2 -fmessage-length=0 -Wall -pthread -fpic -g -O2 -Wall -c libmain.cpp -o libmain.o
g++ -shared -L/usr/local/lib64 -o EBImage.so alg_watershed.o colors.o common.o conversions.o display.o drawables.o flt_distmap.o flt_magick.o flt_morph.o flt_normalize.o flt_thresh.o indexing.o io.o libmain.o -L/usr/lib64 -L/usr/lib64 -L/usr/X11R6/lib64 -L/usr/lib64 -Wl,--rpath -Wl,/usr/lib64 -lfreetype -L/usr/lib -lMagick++ -lWand -lMagick -llcms -ltiff -lfreetype -ljpeg -lXext -lSM -lICE -lX11 -lXt -lbz2 -lz -lpthread -lm -lpthread
** R
** inst
** save image
** help
>>> Building/Updating help pages for package 'EBImage'
Formats: text html latex example
Drawable.class text html latex example
Drawable.draw text html latex example
EBImage-package text html latex
Image.class text html latex example
Image.io text html latex example
alg.watershed text html latex example
colors text html latex example
colors.arithm text html latex
flt.distMap text html latex example
flt.magick-colors text html latex example
flt.magick-enhance text html latex example
flt.magick-segment text html latex example
flt.magick-transform text html latex example
flt.magick text html latex
flt.morph text html latex example
flt.morph.mKernel text html latex example
flt.thresh text html latex example
internals text html latex
updates text html latex
** building package indices ...
* DONE (EBImage)