* checking for file 'stam/DESCRIPTION' ... OK
* preparing 'stam':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
installing R.css in D:/biocbld/1.8d/tmpdir/Rinst716464108
---------- Making package stam ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
making DLL ...
making util.d from util.c
gcc -Id:/biocbld/1.8d/R/include -Wall -O2 -c util.c -o util.o
windres --include-dir d:/biocbld/1.8d/R/include -i stam_res.rc -o stam_res.o
gcc -shared -s -o stam.dll stam.def util.o stam_res.o -Ld:/biocbld/1.8d/R/bin -lR
... DLL made
installing DLL
installing R files
save image
Loading required package: GO
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()' or start with 'help(Biobase)'. For details
on reading vignettes, see the openVignette help page.
Loading required package: pamr
Loading required package: cluster
Loading required package: annaffy
Loading required package: KEGG
installing inst files
installing data files
installing man source files
installing indices
not zipping data
installing help
>>> Building/Updating help pages for package 'stam'
Formats: text html latex example chm
golubTrain.cv text html latex chm
golubTrain.fit text html latex chm
image.stamPrediction text html latex chm
plot.stamCV text html latex chm
plot.stamFit text html latex chm
plot.stamPrediction text html latex chm
stam-internal text html latex chm
stam.cv text html latex example chm
stam.evaluate text html latex example chm
stam.fit text html latex example chm
stam.graph.plot text html latex chm
stam.net text html latex example chm
stam.predict text html latex example chm
stam.rgb.colors text html latex example chm
stam.serve text html latex example chm
stam.writeHTML text html latex example chm
stamCV-class text html latex chm
stamEval-class text html latex chm
stamFit-class text html latex chm
stamINode-class text html latex chm
stamLeaf-class text html latex chm
stamNet-class text html latex chm
stamNode-class text html latex chm
stamPrediction-class text html latex chm
Microsoft HTML Help Compiler 4.74.8702
Compiling d:\biocbld\1.8d\Rpacks\stam\chm\stam.chm
Compile time: 0 minutes, 0 seconds
25 Topics
128 Local links
0 Internet links
1 Graphic
Created d:\biocbld\1.8d\Rpacks\stam\chm\stam.chm, 54,343 bytes
Compression decreased file by 68,356 bytes.
adding MD5 sums
* DONE (stam)
* creating vignettes ... OK
* cleaning src
* removing junk files
* excluding invalid files from 'stam'
Subdirectory 'R' contains invalid file names:
TAGS
Subdirectory 'man' contains invalid file names:
TAGS
* checking for LF line-endings in source files
* checking for empty or unneeded directories
* building 'stam_1.4.0.tar.gz'