TENxPBMCData
This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see TENxPBMCData.
PBMC data from 10X Genomics
Bioconductor version: 3.13
Single-cell RNA-seq data for on PBMC cells, generated by 10X Genomics.
Author: Kasper D. Hansen [aut], Davide Risso [aut], Milan Malfait [ctb], Jeroen Gilis [ctb], Theodore Killian [ctb], Murat Cem Kose [ctb], Chong Tang [ctb], Teun van den Brand [ctb], Dania Machlab [ctb], Stephanie Hicks [aut, cre]
Maintainer: Stephanie Hicks <shicks19 at jhu.edu>
citation("TENxPBMCData")
):
Installation
To install this package, start R (version "4.1") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("TENxPBMCData")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("TENxPBMCData")
Obtaining scRNA-seq data on PBMCs from 10X Genomics | HTML | R Script |
Reference Manual |
Details
biocViews | ExperimentData, ExperimentHub, ExpressionData, RNASeqData, SequencingData, SingleCellData |
Version | 1.10.0 |
License | CC BY 4.0 |
Depends | SingleCellExperiment, HDF5Array |
Imports | AnnotationHub, ExperimentHub |
System Requirements | |
URL |
See More
Suggests | knitr, BiocStyle, snow, BiocFileCache, BiocParallel |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | singleCellTK |
Suggests Me | celda, ExperimentSubset, fcoex, glmGamPoi, iSEE, mbkmeans, schex, scone, scry |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | TENxPBMCData_1.10.0.tar.gz |
Windows Binary | |
macOS 10.13 (High Sierra) | |
Source Repository | git clone https://git.bioconductor.org/packages/TENxPBMCData |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/TENxPBMCData |
Package Short Url | https://bioconductor.org/packages/TENxPBMCData/ |
Package Downloads Report | Download Stats |