ExperimentHub
This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see ExperimentHub.
Client to access ExperimentHub resources
Bioconductor version: 3.13
This package provides a client for the Bioconductor ExperimentHub web resource. ExperimentHub provides a central location where curated data from experiments, publications or training courses can be accessed. Each resource has associated metadata, tags and date of modification. The client creates and manages a local cache of files retrieved enabling quick and reproducible access.
Author: Bioconductor Package Maintainer [cre], Martin Morgan [aut], Marc Carlson [ctb], Dan Tenenbaum [ctb], Sonali Arora [ctb], Valerie Oberchain [ctb], Kayla Morrell [ctb], Lori Shepherd [aut]
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
citation("ExperimentHub")
):
Installation
To install this package, start R (version "4.1") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ExperimentHub")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ExperimentHub")
ExperimentHub: Access the ExperimentHub Web Service | HTML | R Script |
Reference Manual | ||
NEWS | Text |
Details
biocViews | DataImport, GUI, Infrastructure, Software, ThirdPartyClient |
Version | 2.0.0 |
In Bioconductor since | BioC 3.4 (R-3.3) (7.5 years) |
License | Artistic-2.0 |
Depends | methods, BiocGenerics(>= 0.15.10), AnnotationHub(>= 2.19.3), BiocFileCache(>= 1.5.1) |
Imports | utils, S4Vectors, BiocManager, curl, rappdirs |
System Requirements | |
URL | |
Bug Reports | https://github.com/Bioconductor/ExperimentHub/issues |
See More
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | ExperimentHub_2.0.0.tar.gz |
Windows Binary | ExperimentHub_2.0.0.zip |
macOS 10.13 (High Sierra) | ExperimentHub_2.0.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/ExperimentHub |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/ExperimentHub |
Bioc Package Browser | https://code.bioconductor.org/browse/ExperimentHub/ |
Package Short Url | https://bioconductor.org/packages/ExperimentHub/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.13 | Source Archive |