See download stats for: Bioconductor software packages Bioconductor annotation packages Bioconductor workflow packages

Download stats for Bioconductor experiment packages

This page was generated on 2025-03-06 14:19:17 -0500 (Thu, 06 Mar 2025).

The number reported next to each package name is the download score, that is, the average number of distinct IPs that “hit” the package each month for the last 12 months (not counting the current month).

Top 15

1	TCGAbiolinksGUI.data (4114)
2	celldex (3713)
3	ALL (3311)
4	HSMMSingleCell (2982)
5	geneLenDataBase (1980)

6	airway (1778)
7	scRNAseq (1632)
8	pasilla (1002)
9	sesameData (916)
10	tximportData (781)

11	ChAMPdata (740)
12	GSVAdata (738)
13	msigdb (651)
14	TENxPBMCData (625)
15	Illumina450ProbeVariants.db (613)

All experiment packages

All experiment package stats in one file: experiment_pkg_stats.tab

All experiment package download scores in one file: experiment_pkg_scores.tab

See Download stats for Bioconductor experiment repository (all packages combined)

4

4.10.1 (0)

A

	a4Core (0)
	a4Reporting (0)
	aads.rnai (1)
	ABAData (22)
	abc (0)
	abc.data (1)
	ABHgenotypeR (1)
	abind (63)
	ace.fma (1)
	acepack (2)
	ACTIONet (1)
	ActivePathways (1)
	actuar (1)
	ada (1)
	adabag (0)
	AdaptGauss (1)
	adbcdrivermanager (1)
	addinslist (1)
	adductData (72)
	ade4 (4)
	adegenet (1)
	adegraphics (1)
	adehabitat (1)
	adehabitatLT (1)
	adephylo (1)
	ADGofTest (0)
	aditools (0)
	adjustedCurves (0)
	admiral (2)
	admiral.test (0)
	admiraldev (2)
	admiralonco (1)
	admiralophtha (1)
	admiralroche (1)
	admisc (8)
	ADMM (0)
	adSplit (1)
	AER (1)
	afex (2)
	affxparser (1)
	affy (1)
	affycompData (96)
	affycoretools (1)
	affydata (438)
	Affyhgu133A2Expr (80)
	Affyhgu133aExpr (108)
	Affyhgu133Plus2Expr (117)
	affyio (1)
	AffymetrixDataTestFiles (129)
	Affymoe4302Expr (81)
	Affymoe430Expr (1)
	affyPLM (0)
	aggregateBioVar (1)
	AGHmatrix (0)
	AgiMicroRna (0)
	agricolae (11)
	agridat (1)
	agrmt (1)
	AICcmodavg (0)
	aigoraFitMini (1)
	AIMS (1)
	AIPW (0)
	airr (1)
	airway (1778)
	akima (1)
	alabama (0)
	alakazam (1)
	ald (0)
	ALDEx2 (1)
	aldvmm (1)
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	AlgDesign (4)
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	ALL (3311)
	all (1)
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	alpineData (11)
	alr3 (1)
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	alsace (1)
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	altdoc (1)
	amap (1)

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	AmpAffyExample (95)
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	annotate (2)
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	AnnotationForge (1)
	AnnotationHub (3)
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	argus.DS.Credentials (3)
	argusDS.apc.utils (3)
	argusDS.backtesting.engine (2)
	argusDS.data (3)
	argusDS.data.engineering (1)
	argusDS.data.preparation (1)
	argusDS.data.preparation2 (4)
	argusDS.data.visualisation (0)
	argusDS.database (2)
	argusDS.DataValidation (1)
	argusDS.DB.manager.utilities (1)
	argusDS.distributions (0)
	argusDS.driver.importance (2)
	argusDS.FCUtilities (1)
	argusDS.FZ.SourceData (1)
	argusDS.FZ.utils (1)
	argusDS.gamboostLSS (0)
	argusDS.gamlss.distributions (1)
	argusDS.gamlss.forecast (2)
	argusDS.gamlss.modelling (3)
	argusDS.gamlss.smoothers (0)
	argusDS.gamlss.testing (3)
	argusDS.gamlss.utils (2)
	argusDS.GlobalSettings (1)
	argusDS.model.testing (1)
	argusDS.model.tools (3)
	argusDS.model.validation (0)
	argusDS.modeldb (1)
	argusDS.possibility.curves.daily (1)
	argusDS.PossibilityCurves.db.utils (3)
	argusDS.PossibilityCurves.utils (1)
	argusDS.S3 (2)
	argusDS.shiny.utils (1)
	argusDS.signal.backtesting (1)
	argusDS.signal.dataprep (2)
	argusDS.signal.generation (1)
	argusDS.smoothers (0)
	argusDS.spread.trading.utils (2)
	argusDS.Studio.APC (1)
	argusDS.Studio.FC (1)
	argusDS.studio.ml (1)
	argusDS.studio.model.utils (1)
	argusDS.Studio.MyStudio (2)

	argusDS.Studio.permissions (3)
	argusDS.Studio.utils (3)
	argusDS.studio.visualisations (1)
	argusDS.tabulator (3)
	argusDS.trading.optimization (1)
	argusDS.trading.performance (1)
	argusDS.TradingSignals (1)
	argusDS.UI (2)
	argusDS.utilities (1)
	aricode (1)
	arm (5)
	aroma.affymetrix (8)
	aroma.apd (9)
	aroma.core (9)
	aroma.light (1)
	ArrayExpress (1)
	arrayhelpers (0)
	arrayop (1)
	arrayQualityMetrics (0)
	ARRmData (86)
	arrow (22)
	arsenal (1)
	arules (2)
	arulesViz (1)
	ArvadosR (1)
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	ascii (1)
	asciicast (1)
	ASExtras4 (0)
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	ash (6)
	AshkenazimSonChr21 (59)
	ashr (1)
	asht (0)
	ASICSdata (73)
	AsioHeaders (4)
	askpass (154)
	ASMap (1)
	asremlPlus (1)
	assert (0)
	assertive (1)
	assertive.base (2)
	assertive.code (1)
	assertive.data (1)
	assertive.data.uk (1)
	assertive.data.us (1)
	assertive.datetimes (1)
	assertive.files (1)
	assertive.matrices (1)
	assertive.models (1)
	assertive.numbers (1)
	assertive.properties (2)
	assertive.reflection (1)
	assertive.sets (1)
	assertive.strings (1)
	assertive.types (2)
	assertr (2)
	assertthat (2)
	AssessORFData (124)
	ASSET (0)
	AssotesteR (0)
	astsa (0)
	async (1)
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	ATE (1)
	ATR (0)
	attachment (2)
	attempt (1)
	AUC (1)
	AUCell (1)
	audio (1)
	audited (1)
	auth0 (1)
	automap (3)
	autometric (1)
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	av (1)
	ava2 (1)
	aws (1)
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	aws.s3 (6)
	aws.signature (6)
	awsMethods (1)
	azcore (1)
	Azimuth (1)
	AzureAuth (1)
	AzureGraph (4)
	AzureRMR (4)
	AzureStor (1)

B

	b64 (1)
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	babelwhale (0)
	babynames (0)
	backbone (0)
	backports (144)
	BADER (0)
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	baguette (0)
	bain (1)
	BalancedSampling (0)
	ballgown (0)
	bambu (0)
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	bartMachine (0)
	bartMachineJARs (0)
	base2grob (1)
	base64 (3)
	base64enc (1)
	base64url (0)
	basefun (0)
	basemaps (1)
	BASiCS (1)
	basilisk (1)
	basilisk.utils (1)
	batchelor (1)
	BatchJobs (1)
	batchtools (1)
	battenberg (1)
	BayesFactor (2)
	BayesFM (1)
	bayesm (1)
	bayesmeta (0)
	bayesplot (11)
	BayesPostEst (1)
	bayesQR (0)
	bayestestR (12)
	BayesX (0)
	baySeq (1)
	BB (1)
	BBmisc (1)
	bbmle (12)
	bbotk (1)
	bbr (1)
	bbr.bayes (1)
	bccaEndometrial (1)
	bcellViper (599)
	bcp (1)
	BDAtemplates (1)
	bdsmatrix (16)
	BE (1)
	beachmat (2)
	beadarray (0)
	beadarrayExampleData (221)
	BeadArrayUseCases (88)
	BeadDataPackR (0)
	BeadSorted.Saliva.EPIC (119)
	beanplot (1)
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	beepr (2)
	beeswarm (1)
	bench (1)
	benchmarkfdrData2019 (48)
	benchmarkme (1)
	benchmarkmeData (0)
	benchr (0)
	BentoBoxData (0)
	berryFunctions (1)
	Bessel (1)
	bestglm (0)
	bestNormalize (2)
	beta7 (84)
	betareg (1)
	bettermc (1)
	bezier (0)
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	BH (229)
	BIApylon (1)
	BiasedUrn (11)
	BIAutils (1)
	bib2df (1)
	bibliometrix (1)
	bibtex (2)

	biclust (0)
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	bigD (16)
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	biglm (5)
	biglmm (1)
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	bigparallelr (0)
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	bigrquery (11)
	bigsnpr (0)
	bigsparser (1)
	bigstatsr (1)
	bigutils (0)
	bigutilsr (0)
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	binGroup (0)
	binman (2)
	binom (0)
	binr (0)
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	BiocBaseUtils (1)
	BiocCheck (1)
	BiocFileCache (4)
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	BiocGenerics (9)
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	blockmodeling (1)
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	BloodCancerMultiOmics2017 (96)
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	BSgenome.Drerio.UCSC.danRer11 (0)
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	BSgenome.Hsapiens.NCBI.GRCh38 (0)
	BSgenome.Hsapiens.UCSC.hg19 (1)
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C

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	ccdata (112)
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	ccTutorial (48)
	cdcfluview (1)
	cdip.datastore (1)
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	celarefData (48)
	celda (1)
	celldex (3713)
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	Synth (0)
	sys (136)
	sysfonts (3)
	systemfit (0)
	systemfonts (279)
	systemPipeRdata (246)
	syuzhet (0)

T

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	tableHTML (1)
	tableone (0)
	tables (2)
	TabulaMurisData (78)
	TabulaMurisSenisData (87)
	tabulapdf (1)
	tabulizer (1)
	tabulizerjars (1)
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	tanggle (0)
	tarchetypes (7)
	targets (11)
	TargetScoreData (81)
	TargetSearchData (95)
	tartare (95)
	taskscheduleR (1)
	TauStar (0)
	taxadb (1)
	taxize (3)
	taxonomizr (1)
	taylor (1)
	TBX20BamSubset (111)
	TCC (1)
	TCGAbiolinks (0)
	TCGAbiolinksGUI.data (4114)
	TCGAbiolinksGul.data (1)
	TCGAcrcmiRNA (59)
	TCGAcrcmRNA (66)
	TCGAMethylation450k (106)
	tcgaWGBSData.hg19 (6)
	TCGAWorkflowData (121)
	tcgaworkflowdata (1)
	tcltk (1)
	tcltk2 (1)
	tclust (1)
	TeachingDemos (2)
	teal (2)
	teal.builder (1)
	teal.builder.modules (1)
	teal.code (2)
	teal.data (3)
	teal.goshawk (1)
	teal.logger (2)
	teal.modules.clinical (1)
	teal.modules.general (1)
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	teal.osprey (1)
	teal.reporter (2)
	teal.slice (3)
	teal.transform (1)
	teal.widgets (1)
	templater (1)
	tensor (1)
	tensorA (11)
	tensorflow (12)
	TENxBrainData (125)
	TENxBUSData (64)
	TENxPBMCData (625)
	TENxVisiumData (92)
	TENxXeniumData (40)
	tergm (0)
	tern (4)
	tern.gee (4)
	tern.mmrm (2)
	tern.rbmi (1)
	terra (30)
	tesseract (0)
	tester (1)
	TestGenerator (1)
	testit (1)
	testthat (288)
	texreg (2)
	text2vec (1)
	textfeatures (1)
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	textshape (1)
	textshaping (203)
	tfautograph (1)
	TFBSTools (2)
	tfdatasets (0)
	TFisher (1)
	TFMPvalue (8)
	tfrmt (1)
	tfruns (12)

	tfse (1)
	tgp (1)
	TH.data (113)
	thematic (4)
	themeSanofi (1)
	themis (0)
	this.path (1)
	threejs (1)
	ThresholdROC (0)
	tibbke (1)
	tibble (24)
	tictoc (12)
	tidybayes (1)
	tidycensus (4)
	tidyclust (2)
	tidycmprsk (1)
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	tidygraph (30)
	tidyHeatmap (0)
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	tidyposterior (1)
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	tidyr (249)
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	tidySEM (1)
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	tidytree (32)
	tidyTree (0)
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	TimeProjection (1)
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	tinesath1probe (76)
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	tinytable (1)
	tinytest (0)
	tinytex (389)
	tippy (1)
	TiPS (1)
	tis (0)
	tissueTreg (77)
	TitanCNA (0)
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	tkrplot (0)
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	tm (6)
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	TMB (13)
	tmcn (1)
	TMExplorer (53)
	tmle (2)
	tmvnsim (1)

	tmvtnorm (2)
	TNO (0)
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	tolerance (0)
	toOrdinal (1)
	topdownrdata (69)
	topGO (1)
	topicmodels (2)
	topr (8)
	torch (1)
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	traits (1)
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	tram (0)
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	transformr (0)
	TransOmicsData (36)
	transport (1)
	tree (1)
	treeio (9)
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	treemapify (0)
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	TreeTools (1)
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	triangle (1)
	triebeard (4)
	trimcluster (0)
	tripack (0)
	trtf (0)
	truncdist (0)
	truncnorm (3)
	truncreg (0)
	tryCatchLog (1)
	tsbox (1)
	TSCAN (0)
	tseries (9)
	tsfeatures (1)
	tsibble (2)
	tsibbledata (1)
	tsModel (0)
	tsne (1)
	tsoutliers (2)
	TSP (16)
	TSSi (0)
	tsvio (1)
	ttdo (0)
	TTR (6)
	ttservice (1)
	tuberculosis (43)
	tufte (0)
	TumourMethData (55)
	tune (14)
	tuneRanger (1)
	Turnover.cells.pSILAC.TMT (1)
	twang (2)
	twangContinuous (0)
	tweeDEseqCountData (187)
	tweedie (0)
	tweenr (44)
	twilight (1)
	TwoSampleMR (1)
	twosamples (1)
	TxDb.Hsapiens.UCSC.hg19.knownGene (1)
	TxDb.Hsapiens.UCSC.hg38.knownGene (1)
	txdbmaker (1)
	tximeta (1)
	tximport (1)
	tximportDat (0)
	tximportData (781)
	txtq (0)
	tzdb (35)

U

V

W

	WA43966.shareR.3043877 (1)
	waffle (1)
	waiter (10)
	wakefield (0)
	waldo (185)
	wallace (1)
	warp (14)
	wateRmelon (1)
	waved (1)
	waveslim (1)
	waveTilingData (31)
	wdm (0)
	wdman (2)
	weaver (0)
	webchem (1)
	webdriver (0)
	WeberDivechaLCdata (63)
	webfakes (0)
	WebGestaltR (1)
	webmockr (0)
	webp (1)

	webshot (21)
	webshot2 (2)
	websocket (22)
	webutils (2)
	WeightIt (3)
	weights (3)
	WES.1KG.WUGSC (87)
	wesanderson (1)
	WGCNA (15)
	WGScan (0)
	WGSmapp (76)
	wheatmap (0)
	whereami (0)
	whisker (20)
	whitening (0)
	whoami (1)
	WibiR (1)
	widgetframe (1)
	widgetTools (1)
	WikidataQueryServiceR (0)
	WikidataR (0)

	WikipediR (6)
	wikitaxa (0)
	wildmeta (0)
	winboxr (1)
	withr (276)
	wk (38)
	wkb (1)
	worcs (1)
	wordcloud (0)
	wordcloud2 (0)
	workflowr (1)
	workflows (12)
	workflowsets (13)
	WorldFlora (1)
	worrms (2)
	wrapr (1)
	Wrench (0)
	writexl (36)
	WriteXLS (6)
	wrMisc (1)
	WRS2 (2)

X

Y

	yaImpute (2)
	yaml (303)
	YAPSA (1)
	yardstick (20)
	yeastCC (120)

	yeastExpData (229)
	yeastGSData (68)
	yeastNagalakshmi (118)
	yeastRNASeq (133)
	ymlthis (0)

	ympes (1)
	yri1kgv (31)
	yriMulti (8)
	yspec (1)
	yulab.utils (70)

Z

	zCompositions (11)
	zeallot (1)
	zebrafishRNASeq (208)
	zellkonverter (1)

	zelusutils (1)
	zen4R (0)
	zenith (1)
	zinbwave (1)

	zip (186)
	Ziploc (1)
	zlibbioc (5)
	zoo (27)

Stats generated by https://github.com/Bioconductor/download_stats/