mrcImageFourierShellCorrelation
Usage
Usage: mrcImageFourierShellCorrelation
Options:
[-i1[input1] In1 (NULL ).as(inFile::mrcImage ) ] :Optional :Input:
[-i2[input2] In2 (NULL ).as(inFile::mrcImage ) ] :Optional :Input:
[-o[utput] Out (stdout ).as(outFile::ASCII ) ] :Optional :Output:FSC
[-SNR ] :Optional :flagSNR
[-FSCfull ] :Optional :flagFSCfull
[-Cref ] :Optional :flagCref
[-NoiseWeighted Brestore (-1000 ).as(Real ) ] :Optional :flagNoiseWeighted: Cref*exp(-Bfactor/(4*d^2)
[-d[elta] delta (0 ).as(Real ) ] :Optional :Interval of output data(1/A). Default 1/(Nx*size of pixel)
[-z[position] z (0 ).as(Integer ) ] :Optional :z position of reference file to correlate.For mode2=1 only
[-L[owThreshold] L (0 ).as(Real ) ] :Optional :Low threshold for mode +2.
[-H[ighThreshold] H (0 ).as(Real ) ] :Optional :High threshold for mode +2.
[-c[onfig] configFile (NULL ).as(inFile ) ] :Optional :ConfigurationFile
[-m[ode] mode (0 ).as(Integer ) ] :Optional :Mode
[-M[ode2] mode2 (0 ).as(Integer ) ] :Optional :Mode2
[-I1[nput array of file]In1Array (stdin ).as(inFileList ) ] :Optional :InputDataFiles
----- mode -----
0: Fourier shell correlation.
1: Fourier shell phase residual.
+2: Correlation between L and H
+4: Without equator.
----- mode 2 -----
0: Correlation between same size images
1: Correlation between 2D image and image extracted from 3D image.
+2: Correlation between 2D different size images. In1 is compared with center of In2.