See download stats for: Bioconductor software packages Bioconductor annotation packages Bioconductor workflow packages

Download stats for Bioconductor experiment packages

This page was generated on 2025-02-06 08:07:47 -0500 (Thu, 06 Feb 2025).

The number reported next to each package name is the download score, that is, the average number of distinct IPs that “hit” the package each month for the last 12 months (not counting the current month).

Top 15

1	TCGAbiolinksGUI.data (4033)
2	celldex (3700)
3	ALL (3370)
4	HSMMSingleCell (2965)
5	geneLenDataBase (1978)

6	airway (1824)
7	scRNAseq (1670)
8	pasilla (1022)
9	sesameData (936)
10	tximportData (796)

11	ChAMPdata (748)
12	GSVAdata (747)
13	msigdb (653)
14	TENxPBMCData (647)
15	Illumina450ProbeVariants.db (624)

All experiment packages

All experiment package stats in one file: experiment_pkg_stats.tab

All experiment package download scores in one file: experiment_pkg_scores.tab

See Download stats for Bioconductor experiment repository (all packages combined)

4

4.10.1 (0)

A

	a4Core (0)
	a4Reporting (0)
	aads.rnai (1)
	ABAData (22)
	abc (0)
	abc.data (1)
	ABHgenotypeR (1)
	abind (56)
	ace.fma (1)
	acepack (2)
	ACTIONet (1)
	ActivePathways (1)
	actuar (1)
	ada (1)
	adabag (0)
	AdaptGauss (1)
	adbcdrivermanager (1)
	addinslist (1)
	adductData (70)
	ade4 (4)
	adegenet (1)
	adegraphics (1)
	adehabitat (1)
	adehabitatLT (1)
	adephylo (1)
	ADGofTest (0)
	aditools (0)
	adjustedCurves (0)
	admiral (2)
	admiral.test (0)
	admiraldev (2)
	admiralonco (1)
	admiralophtha (1)
	admiralroche (1)
	admisc (8)
	ADMM (0)
	adSplit (1)
	AER (1)
	afex (2)
	affxparser (1)
	affy (1)
	affycompData (94)
	affycoretools (1)
	affydata (445)
	Affyhgu133A2Expr (76)
	Affyhgu133aExpr (108)
	Affyhgu133Plus2Expr (113)
	affyio (1)
	AffymetrixDataTestFiles (132)
	Affymoe4302Expr (78)
	Affymoe430Expr (1)
	affyPLM (0)
	aggregateBioVar (1)
	AGHmatrix (0)
	AgiMicroRna (0)
	agricolae (10)
	agridat (1)
	agrmt (1)
	AICcmodavg (1)
	aigoraFitMini (1)
	AIMS (1)
	AIPW (0)
	airr (1)
	airway (1824)
	akima (1)
	alabama (0)
	alakazam (1)
	ald (0)
	ALDEx2 (1)
	aldvmm (1)
	alembic (0)
	AlgDesign (4)
	alkahest.generic (0)
	ALL (3370)
	all (1)
	allenpvc (3)
	ALLMLL (213)
	alluvial (0)
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	alphahull (0)
	alphashape3d (0)
	AlphaSimR (1)
	alphavantager (1)
	alpineData (10)
	alr3 (1)
	alr4 (0)
	alsace (1)
	altair (0)
	altdoc (1)
	amap (1)

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	Amelia (3)
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	amlogger (0)
	AmpAffyExample (91)
	ANCOMBC (1)
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	Andromeda (1)
	AneuFinderData (105)
	angrycell (1)
	animation (1)
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	anndata (1)
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	annotate (2)
	AnnotationDbi (16)
	AnnotationFilter (1)
	AnnotationForge (1)
	AnnotationHub (3)
	AnnotationHubData (1)
	annotatr (0)
	anRichment (0)
	antaresProcessing (1)
	anticlust (1)
	antiProfilesData (95)
	AnVIL (0)
	anytime (12)
	aod (2)
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	ape (63)
	apeglm (1)
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	aplot (52)
	appgen (0)
	aqp (1)
	aracne.networks (78)
	archive (2)
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	argparse (14)
	argparser (1)
	argus.DS.Credentials (3)
	argusDS.apc.utils (3)
	argusDS.backtesting.engine (2)
	argusDS.data (3)
	argusDS.data.engineering (1)
	argusDS.data.preparation (1)
	argusDS.data.preparation2 (4)
	argusDS.data.visualisation (0)
	argusDS.database (2)
	argusDS.DataValidation (1)
	argusDS.DB.manager.utilities (1)
	argusDS.distributions (0)
	argusDS.driver.importance (2)
	argusDS.FCUtilities (1)
	argusDS.FZ.SourceData (1)
	argusDS.FZ.utils (1)
	argusDS.gamboostLSS (0)
	argusDS.gamlss.distributions (1)
	argusDS.gamlss.forecast (2)
	argusDS.gamlss.modelling (3)
	argusDS.gamlss.smoothers (0)
	argusDS.gamlss.testing (3)
	argusDS.gamlss.utils (2)
	argusDS.GlobalSettings (1)
	argusDS.model.testing (1)
	argusDS.model.tools (3)
	argusDS.model.validation (0)
	argusDS.modeldb (1)
	argusDS.possibility.curves.daily (1)
	argusDS.PossibilityCurves.db.utils (3)
	argusDS.PossibilityCurves.utils (1)
	argusDS.S3 (2)
	argusDS.shiny.utils (1)
	argusDS.signal.backtesting (1)
	argusDS.signal.dataprep (2)
	argusDS.signal.generation (1)
	argusDS.smoothers (0)
	argusDS.spread.trading.utils (2)
	argusDS.Studio.APC (1)
	argusDS.Studio.FC (1)
	argusDS.studio.ml (1)
	argusDS.studio.model.utils (1)
	argusDS.Studio.MyStudio (2)

	argusDS.Studio.permissions (3)
	argusDS.Studio.utils (3)
	argusDS.studio.visualisations (1)
	argusDS.tabulator (3)
	argusDS.trading.optimization (1)
	argusDS.trading.performance (1)
	argusDS.TradingSignals (1)
	argusDS.UI (2)
	argusDS.utilities (1)
	aricode (1)
	arm (5)
	aroma.affymetrix (8)
	aroma.apd (9)
	aroma.core (8)
	aroma.light (1)
	ArrayExpress (1)
	arrayhelpers (0)
	arrayop (1)
	arrayQualityMetrics (0)
	ARRmData (86)
	arrow (24)
	arsenal (1)
	arules (3)
	arulesViz (1)
	ArvadosR (1)
	arvupload (1)
	ascii (1)
	asciicast (1)
	ASExtras4 (0)
	AsgntDAMacro (1)
	ash (6)
	AshkenazimSonChr21 (54)
	ashr (2)
	asht (0)
	ASICSdata (68)
	AsioHeaders (5)
	askpass (160)
	ASMap (1)
	asremlPlus (1)
	assert (0)
	assertive (1)
	assertive.base (2)
	assertive.code (1)
	assertive.data (1)
	assertive.data.uk (1)
	assertive.data.us (1)
	assertive.datetimes (1)
	assertive.files (1)
	assertive.matrices (1)
	assertive.models (1)
	assertive.numbers (1)
	assertive.properties (4)
	assertive.reflection (1)
	assertive.sets (1)
	assertive.strings (1)
	assertive.types (4)
	assertr (2)
	assertthat (2)
	AssessORFData (123)
	ASSET (0)
	AssotesteR (0)
	astsa (0)
	async (1)
	ATACseqQC (1)
	ATE (1)
	ATR (0)
	attachment (2)
	attempt (0)
	AUC (1)
	AUCell (1)
	audio (2)
	audited (1)
	auth0 (1)
	automap (3)
	autometric (1)
	autoslideR (1)
	av (1)
	ava2 (2)
	aws (2)
	aws.ec2metadata (0)
	aws.s3 (6)
	aws.signature (6)
	awsMethods (1)
	azcore (1)
	Azimuth (1)
	AzureAuth (2)
	AzureGraph (5)
	AzureRMR (5)
	AzureStor (1)

B

	b64 (1)
	babelgene (7)
	babelmixr2 (1)
	babelwhale (0)
	babynames (0)
	backbone (0)
	backports (140)
	BADER (0)
	badger (1)
	badminton (1)
	baguette (0)
	bain (1)
	BalancedSampling (0)
	ballgown (0)
	bambu (0)
	BART (0)
	bartMachine (0)
	bartMachineJARs (0)
	base2grob (1)
	base64 (4)
	base64enc (1)
	base64url (1)
	basefun (0)
	basemaps (1)
	BASiCS (1)
	basilisk (1)
	basilisk.utils (1)
	batchelor (1)
	BatchJobs (1)
	batchtools (1)
	battenberg (1)
	BayesFactor (2)
	BayesFM (1)
	bayesm (1)
	bayesmeta (0)
	bayesplot (12)
	BayesPostEst (1)
	bayesQR (0)
	bayestestR (12)
	BayesX (0)
	baySeq (2)
	BB (1)
	BBmisc (1)
	bbmle (14)
	bbotk (1)
	bbr (1)
	bbr.bayes (1)
	bccaEndometrial (1)
	bcellViper (603)
	bcp (1)
	BDAtemplates (1)
	bdsmatrix (16)
	BE (1)
	beachmat (2)
	beadarray (0)
	beadarrayExampleData (231)
	BeadArrayUseCases (80)
	BeadDataPackR (0)
	BeadSorted.Saliva.EPIC (114)
	beanplot (1)
	beaver (1)
	beepr (2)
	beeswarm (1)
	bench (0)
	benchmarkfdrData2019 (43)
	benchmarkme (1)
	benchmarkmeData (0)
	benchr (0)
	BentoBoxData (0)
	berryFunctions (1)
	Bessel (1)
	bestglm (0)
	bestNormalize (2)
	beta7 (77)
	betareg (1)
	bettermc (1)
	bezier (0)
	BFpack (1)
	BgeeDB (0)
	BGLR (1)
	bgs.ggtheme (1)
	bgs.hephaistos (1)
	bgs.hermes (1)
	BH (249)
	BIApylon (1)
	BiasedUrn (12)
	BIAutils (1)
	bib2df (1)

	bibtex (2)
	biclust (0)
	BIEN (1)
	bife (0)
	biganalytics (0)
	bigassertr (1)
	bigD (13)
	bigdist (0)
	BIGL (0)
	biglasso (0)
	biglm (5)
	biglmm (1)
	bigmemory (3)
	bigmemory.sri (3)
	bigparallelr (0)
	bigreadr (1)
	bigrquery (14)
	bigsnpr (0)
	bigsparser (1)
	bigstatsr (1)
	bigutils (0)
	bigutilsr (0)
	billboarder (8)
	binb (1)
	bindr (1)
	bindrcpp (1)
	binGroup (0)
	binman (2)
	binom (0)
	binr (0)
	bio3d (4)
	biobank (1)
	Biobase (9)
	BioBase (0)
	bioc::GenomeInfoDbData (0)
	BiocBaseUtils (1)
	BiocCheck (1)
	BiocFileCache (4)
	BiocFileCaches (1)
	BiocGenerics (10)
	BiocInstaller (1)
	BiocIO (2)
	BiocManager (344)
	BiocNeighbors (2)
	Bioconductor (1)
	BiocParallel (15)
	BiocSingular (2)
	BiocStyle (1)
	BiocVersion (11)
	biocViews (1)
	BiodiversityR (1)
	BioEnricher (1)
	Biogenerics (0)
	BioGenerics (0)
	BioImageDbs (47)
	BioInstaller (1)
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	biomaRt (2)
	biomartr (1)
	biomformat (1)
	biomod2 (1)
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	BioPlex (46)
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	biostatR (0)
	biostatUtil (0)
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	Biostrings (15)
	biotmleData (72)
	biotools (1)
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	bit (116)
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	bizdays (2)
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	bladderbatch (478)
	BlakerCI (0)
	blastula (1)
	blavaan (1)
	blimaTestingData (77)
	blme (7)
	blob (46)

	blockcluster (1)
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	blockmodeling (1)
	blogdown (0)
	BloodCancerMultiOmics2017 (91)
	bluster (1)
	BlythStillCasellaCI (1)
	BMA (1)
	BMisc (0)
	bmp (0)
	bmspal (1)
	bnlearn (2)
	bodymapRat (124)
	BOIN (0)
	bold (2)
	bookdown (38)
	Boom (1)
	boomer (1)
	BoomSpikeSlab (1)
	boot (93)
	bootstrap (0)
	botor (0)
	box (11)
	box.linters (1)
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	bRacatus (1)
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	brainImageRdata (5)
	brave (0)
	breakpointRdata (106)
	breastCancerMAINZ (132)
	breastCancerMKI (0)
	breastCancerNKI (128)
	breastCancerTRANSBIG (126)
	breastCancerUNT (110)
	breastCancerUPP (145)
	breastCancerVDX (181)
	brew (46)
	brgedata (111)
	brglm (1)
	brglm2 (1)
	bricks (0)
	brickster (0)
	BridgeDbR (0)
	bridgesampling (0)
	brio (182)
	brms (1)
	brmsmargins (0)
	Brobdingnag (1)
	broman (1)
	bronchialIL13 (76)
	broom (133)
	broom.helpers (20)
	broom.mixed (2)
	broomExtra (1)
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	bs4Dash (9)
	BSgenome (3)
	BSgenome.Drerio.UCSC.danRer11 (0)
	BSgenome.Ggallus.ENSEMBL.galGal6 (0)
	BSgenome.Hsapiens.1000genomes.hs37d5 (0)
	BSgenome.Hsapiens.NCBI.GRCh38 (0)
	BSgenome.Hsapiens.UCSC.hg19 (1)
	BSgenome.Hsapiens.UCSC.hg38 (3)
	BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major (1)
	BSgenome.Mmul10.SIVmac251 (0)
	BSgenome.Mmulatta.NCBI.mmul10.tmp (0)
	BSgenome.Mmusculus.UCSC.mm10 (1)
	BSgenome.Mmusculus.UCSC.mm39 (0)
	BSgenome.Oaries.ENSEMBL.RambV2 (1)
	BSgenome.Omela.CUSTOM.oenMel1.1 (0)
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C

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	car (37)
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	ccaPP (1)
	ccdata (109)
	ccdrAlgorithm (1)
	ccDSM (1)
	CCl4 (110)
	ccTutorial (48)
	cdcfluview (1)
	cdip.datastore (1)
	CDMConnector (1)
	celarefData (44)
	celda (1)
	celldex (3700)
	CellMapperData (58)
	cellpypes (1)
	cellranger (1)
	cellxgene.census (1)
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	ChAMPdata (748)
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	chevron (1)
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	ChimpHumanBrainData (70)
	ChIPComp (0)
	chipenrich (0)
	chipenrich.data (135)
	ChIPexoQualExample (73)
	ChIPpeakAnno (1)
	ChIPQC (1)
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	chipseq (0)
	chipseqDBData (58)
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	tzdb (40)

U

V

W

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	webp (1)

	webshot (25)
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	widgetframe (1)
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	withr (296)
	wk (41)
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	wrMisc (1)
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X

Y

	yaImpute (2)
	yaml (309)
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	yardstick (23)
	yeastCC (116)

	yeastExpData (228)
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	yeastNagalakshmi (114)
	yeastRNASeq (129)
	ymlthis (0)

	yri1kgv (30)
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	yspec (1)
	yulab.utils (76)

Z

	zCompositions (11)
	zeallot (1)
	zebrafishRNASeq (217)
	zellkonverter (1)

	zelusutils (1)
	zen4R (0)
	zenith (1)
	zinbwave (1)

	zip (203)
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	zlibbioc (5)
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