Package Download_score canine2probe 40 org.Gg.eg.db 428 hgu95av2.db 729 pd.hg.u133b 40 oligoData 95 KEGG.db 275 canine2.db 52 mouse4302cdf 125 TxDb.Scerevisiae.UCSC.sacCer2.sgdGene 35 hgu133b.db 69 hu6800subbcdf 34 BSgenome.Hsapiens.UCSC.hg19 2728 yeast2.db 67 org.Dr.eg.db 867 org.Mm.eg.db 8405 BSgenome.Celegans.UCSC.ce2 355 h20kcod.db 38 org.Cf.eg.db 447 pd.soybean 40 SNPlocs.Hsapiens.dbSNP.20100427 29 hgu133a2frmavecs 23 org.Bt.eg.db 458 hgu133acdf 227 pd.aragene.1.0.st 34 pd.mouse430a.2 38 mu11ksubbprobe 38 pd.yg.s98 35 BSgenome.Dmelanogaster.UCSC.dm3 247 worm.db0 59 drosophila2.db 53 moe430bprobe 37 BSgenome.Hsapiens.UCSC.hg18 267 hu35ksubaprobe 39 pd.rg.u34b 32 rgu34b.db 49 org.Ce.eg.db 545 BSgenome.Drerio.UCSC.danRer6 38 soybeancdf 102 BSgenome.Dmelanogaster.UCSC.dm2 61 hu6800subdcdf 35 IlluminaHumanMethylation450kanno.ilmn12.hg19 1489 hugene20sttranscriptcluster.db 78 hgu133aprobe 169 mogene11sttranscriptcluster.db 54 ygs98.db 56 BSgenome.Btaurus.UCSC.bosTau6 52 illuminaHumanv4.db 293 mguatlas5k.db 47 pd.ecoli.asv2 35 humanomni5quadv1bCrlmm 23 drosophila2probe 162 hgubeta7.db 50 pd.plasmodium.anopheles 35 pd.drosgenome1 37 pd.xenopus.laevis 36 canine.db 47 pd.wheat 44 pd.mg.u74b 33 hthgu133b.db 47 ath1121501probe 43 htmg430acdf 39 canineprobe 37 pd.rjpgene.1.1.st 31 BSgenome.Cfamiliaris.UCSC.canFam2 41 org.EcK12.eg.db 362 hgug4112a.db 90 pd.hu6800 52 porcineprobe 41 hgu133a2probe 49 mogene.1.0.st.v1frmavecs 21 hugene10stprobeset.db 58 hgfocuscdf 67 rhesuscdf 38 hugene11sttranscriptcluster.db 86 mgug4121a.db 51 pd.hg.u133.plus.2 240 pd.drosophila.2 34 wheatcdf 39 ragene10stv1cdf 35 gahgu133plus2probe 24 gahgu95bprobe 25 pd.hc.g110 34 hu6800subacdf 32 mu19ksubccdf 33 poplarprobe 38 pd.barley1 36 mgu74bv2cdf 36 mgu74acdf 37 rnu34probe 34 hgfocus.db 65 pd.mapping250k.nsp 167 gahgu133plus2cdf 27 bovinecdf 41 pd.sugar.cane 34 hi16cod.db 38 ragene21stprobeset.db 41 hom.Dr.inp.db 27 ecoliasv2probe 39 pd.cytogenetics.array 47 pd.cyngene.1.0.st 36 huex.1.0.st.v2frmavecs 32 hugene.1.0.st.v1frmavecs 26 tomatoprobe 38 pd.rhesus 41 mu6500subacdf 33 tomatocdf 33 pd.rice 52 pd.hg18.60mer.expr 59 plasmodiumanophelesprobe 37 hu35ksubbprobe 37 ygs98cdf 40 ecoli2cdf 37 ratCHRLOC 29 org.Ag.eg.db 248 pd.ovigene.1.1.st 41 pd.rhegene.1.1.st 37 pd.charm.hg18.example 36 mirna20cdf 36 pd.soygene.1.1.st 48 TxDb.Athaliana.BioMart.plantsmart16 7 pd.rg.u34a 37 org.Tgondii.eg.db 22 illuminaMousev1p1.db 40 gahgu133plus2.db 25 hgu219.db 107 hgu95dprobe 37 pd.mg.u74c 32 mu11ksubb.db 46 HsAgilentDesign026652.db 82 pd.celegans 39 BSgenome.Ptroglodytes.UCSC.panTro2 41 pd.hg.focus 37 pd.2006.07.18.mm8.refseq.promoter 37 pd.pae.g1a 35 mu11ksubaprobe 40 bsubtilisprobe 39 Roberts2005Annotation.db 45 moe430bcdf 36 m20kcod.db 36 citrusprobe 37 gahgu133a.db 27 rnu34.db 49 HuExExonProbesetLocation 35 lumiMouseIDMapping 40 TxDb.Mmusculus.UCSC.mm10.knownGene 1362 pd.zebrafish 35 adme16cod.db 42 pd.mouse430.2 69 BSgenome.Scerevisiae.UCSC.sacCer1 103 mogene21sttranscriptcluster.db 55 human370quadv3cCrlmm 32 rgug4131a.db 47 BSgenome.Drerio.UCSC.danRer5 37 hom.Dm.inp.db 32 mogene20stprobeset.db 41 htratfocusprobe 38 mu19ksuba.db 45 JazaeriMetaData.db 50 mogene21stprobeset.db 44 chimp.db0 58 IlluminaHumanMethylation27kmanifest 42 nugohs1a520180cdf 35 ragene20sttranscriptcluster.db 43 illuminaMousev1p1BeadID.db 6 hugene21stprobeset.db 48 ygs98frmavecs 23 FDb.UCSC.snp137common.hg19 37 BSgenome.Rnorvegicus.UCSC.rn4 64 mouse430a2frmavecs 22 htmg430pmprobe 37 hgug4111a.db 51 pd.ragene.1.1.st.v1 43 hom.Rn.inp.db 32 pd.hg.u95b 34 pd.ht.mg.430a 37 gahgu95cprobe 25 humancytosnp12v2p1hCrlmm 27 hwgcod.db 40 hthgu133bprobe 39 domainsignatures 0 SIFT.Hsapiens.dbSNP137 98 illuminaMousev2BeadID.db 9 mm74av1mmentrezgprobe 2 hu6800 3 xlahomology 4 hsahomology 2 BSgenome.Mmulatta.UCSC.rheMac3.masked 31 BSgenome.Ptroglodytes.UCSC.panTro2.masked 27 BSgenome.Sscrofa.UCSC.susScr3 32 ath1attair 3 huex10sttranscriptcluster.db 54 org.MeSH.Pae.PA14.db 4 org.MeSH.Ani.FGSC.db 4 org.MeSH.Cfa.db 4 org.MeSH.Cbr.db 4 TxDb.Athaliana.BioMart.plantsmart21 2 MeSH.PCR.db 22 org.MeSH.Dya.db 4 org.MeSH.Cin.db 4 org.MeSH.Atu.K84.db 5 org.MeSH.Eqc.db 4 org.MeSH.Gma.db 3 org.MeSH.Bsu.Bsn5.db 5 MeSH.AOR.db 23 org.MeSH.Miy.db 5 org.MeSH.Dda.3937.db 4 org.MeSH.Mtr.db 4 org.MeSH.Ptr.db 4 org.MeSH.Mml.db 4 org.MeSH.Eco.SMS35.db 4 org.MeSH.Mmu.db 4 org.MeSH.Eco.536.db 3 org.MeSH.Sau.COL.db 4 org.MeSH.Bta.db 5 org.MeSH.Rno.db 4 org.MeSH.Eco.55989.db 4 org.MeSH.Eco.E24377A.db 4 org.MeSH.Syn.db 5 org.MeSH.Bsu.TUB10.db 4 org.MeSH.Bsu.168.db 5 org.MeSH.Der.db 4 raex10stprobeset.db 42 MafDb.ESP6500SI.V2.SSA137.dbSNP138 4 phastCons100way.UCSC.hg19 209 humanomni258v1aCrlmm 2 illuminaRatv1BeadID.db 6 SNPlocs.Hsapiens.dbSNP.20080617 6 hs133av2hsentrezg 2 TxDb.Hsapiens.UCSC.hg38.knownGene 2491 ChemmineDrugs 63 pd.elegene.1.1.st 27 pd.elegene.1.0.st 29 pd.guigene.1.0.st 26 pd.chigene.1.1.st 34 pd.rusgene.1.1.st 32 mta10stprobeset.db 12 XtraSNPlocs.Hsapiens.dbSNP141.GRCh38 18 mogene10stv1.r3cdf 1 illuminaHumanv4BeadID.db 3 hs95av2hsentrezgcdf 2 ragene10stv1.r3cdf 1 hguatlas13k 3 hs133xhsrefseq7probe 1 drosophila2 3 gahgu95d 2 hs133bhsrefseq7cdf 1 hs133bptensg7cdf 1 BSgenome.Hsapiens.NCBI.b36v3 1 gmahomology 3 hgu133b 3 m20kcod 4 hs133av2ptensg7cdf 1 cfcanine2cfense7cdf 1 yeast2 3 btahomology 3 org.Sc.sgd.db 578 human.db0 112 BSgenome.Mmusculus.UCSC.mm9 321 drosgenome1probe 37 hgu133atagprobe 54 hgu133plus2cdf 713 pd.ragene.1.0.st.v1 50 pd.mapping50k.xba240 174 org.Rn.eg.db 1674 hgu95bcdf 39 ath1121501cdf 60 org.Xl.eg.db 301 mgu74av2cdf 42 hom.At.inp.db 27 pd.porgene.1.1.st 36 mgu74bv2.db 48 u133aaofav2cdf 39 IlluminaHumanMethylation27k.db 49 chickenprobe 39 lumiRatV1 2 BSgenome.Tgondii.ToxoDB.7.0 45 hgu133a2.db 248 mouseCHRLOC 28 hu35ksubccdf 35 pd.hugene.1.1.st.v1 87 pd.rcngene.1.1.st 34 pd.hugene.1.0.st.v1 234 drosgenome1.db 64 IlluminaHumanMethylation450kmanifest 1263 TxDb.Scerevisiae.UCSC.sacCer3.sgdGene 90 agprobe 38 canine2cdf 38 anopheles.db0 56 porcine.db 48 hguatlas13k.db 49 mogene10sttranscriptcluster.db 106 rgu34c.db 48 pd.mg.u74bv2 35 porcinecdf 38 BSgenome.Scerevisiae.UCSC.sacCer2 197 mgu74av2.db 57 human650v3aCrlmm 31 r10kcod.db 41 org.Sco.eg.db 25 rtu34probe 38 hgu133afrmavecs 59 moe430a.db 60 hom.Ce.inp.db 29 hgu95c.db 51 hugene10stv1probe 45 mu19ksubbcdf 33 FDb.FANTOM4.promoters.hg19 32 barley1cdf 38 bovine.db0 62 drosophila2cdf 40 pd.ecoli 34 pd.hg.u133a 77 mpedbarray.db 50 hthgu133acdf 46 mouse430a2cdf 45 hom.Hs.inp.db 42 hugene11stprobeset.db 59 pd.aragene.1.1.st 41 RmiR.Hs.miRNA 43 moe430acdf 40 BSgenome.Scerevisiae.UCSC.sacCer3 165 mirna102xgaincdf 32 BSgenome.Drerio.UCSC.danRer7 285 lumiMouseAll.db 42 TxDb.Mmusculus.UCSC.mm9.knownGene 596 illuminaHumanv2.db 76 mogene20sttranscriptcluster.db 53 hgug4845a.db 32 rhesusprobe 38 drosgenome1cdf 37 mgu74bv2probe 35 pd.medicago 32 RnAgilentDesign028282.db 50 pd.chicken 34 TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts 119 pd.cangene.1.0.st 39 pd.e.coli.2 40 gahgu133bcdf 19 pd.bovgene.1.1.st 90 BSgenome.Athaliana.TAIR.TAIR9 79 maizecdf 35 bovineprobe 44 celeganscdf 39 genomewidesnp5Crlmm 161 hgu219probe 35 SIFT.Hsapiens.dbSNP132 82 pd.moex.1.0.st.v1 54 rgu34a.db 56 poplarcdf 38 pd.tomato 34 h10kcod.db 41 rae230bcdf 37 ragene10stprobeset.db 48 rtu34cdf 35 BSgenome.Gaculeatus.UCSC.gasAcu1 38 ye6100subbcdf 34 hthgu133afrmavecs 23 rae230a.db 93 pd.zebgene.1.0.st 32 illuminaMousev2.db 60 pd.bsubtilis 38 pd.canine.2 35 pd.mirna.3.1 31 yeast2probe 41 mgu74ccdf 35 pd.u133.x3p 44 OperonHumanV3.db 47 hom.Sc.inp.db 31 rae230acdf 38 mgu74bcdf 37 ecolicdf 59 pd.vitis.vinifera 35 hthgu133a.db 105 mgu74a.db 50 pd.2006.07.18.hg18.refseq.promoter 37 ye6100subccdf 35 hgu219cdf 66 medicagocdf 35 pd.hg.u133a.tag 36 mgug4104a.db 44 bsubtiliscdf 34 TxDb.Hsapiens.UCSC.hg18.knownGene 548 gahgu133aprobe 25 gahgu133bprobe 24 mu11ksuba.db 47 gahgu95av2.db 22 pd.zebgene.1.1.st 40 nugohs1a520180probe 33 xtropicalisprobe 37 SNPlocs.Hsapiens.dbSNP.20111119 31 hcg110.db 50 hgu95cprobe 40 hgu95bprobe 38 mogene10stprobeset.db 54 mouse4302frmavecs 56 TxDb.Rnorvegicus.UCSC.rn4.ensGene 276 RmiR.hsa 40 ye6100subdcdf 37 hu6800probe 40 pd.porgene.1.0.st 36 mu19ksubacdf 35 rhesus.db0 63 SNPlocs.Hsapiens.dbSNP.20101109 36 pd.mogene.2.1.st 45 FDb.InfiniumMethylation.hg19 1436 targetscan.Hs.eg.db 123 plasmodiumanophelescdf 52 BSgenome.Hsapiens.UCSC.hg17 53 BSgenome.Btaurus.UCSC.bosTau3 52 htmg430aprobe 43 pd.hg.u133a.2 50 pd.mapping50k.hind240 173 paeg1acdf 35 pedbarrayv10.db 49 mgu74cv2.db 53 xlaevis.db 48 hu35ksubc.db 48 pd.hg.u95av2 71 HuO22.db 46 pd.bovgene.1.0.st 37 gahgu95bcdf 20 hcg110cdf 36 vitisviniferacdf 38 mirna10probe 34 pd.ovigene.1.0.st 35 BSgenome.Osativa.MSU.MSU7 82 Rattus.norvegicus 66 pd.hg.u95e 38 xlaevis2probe 32 ragene20stprobeset.db 43 gahgu95eprobe 24 HuExExonProbesetLocationHg19 34 human1mv1cCrlmm 31 hgu95b.db 51 TxDb.Celegans.UCSC.ce6.ensGene 271 Mu22v3.db 47 SNPlocs.Hsapiens.dbSNP.20071016 4 rae230a 4 BSgenome.Ggallus.UCSC.galGal3.masked 26 BSgenome.Mmusculus.UCSC.mm9.masked 49 BSgenome.Mmusculus.UCSC.mm10.masked 73 BSgenome.Drerio.UCSC.danRer7.masked 26 BSgenome.Rnorvegicus.UCSC.rn5.masked 40 BSgenome.Gaculeatus.UCSC.gasAcu1.masked 25 BSgenome.Mmulatta.UCSC.rheMac2.masked 29 BSgenome.Mmusculus.UCSC.mm8.masked 85 BSgenome.Rnorvegicus.UCSC.rn4.masked 33 BSgenome.Dmelanogaster.UCSC.dm2.masked 26 huex10stprobeset.db 39 org.MeSH.Ocu.db 4 org.MeSH.Pfa.3D7.db 4 org.MeSH.Eco.SE11.db 4 org.MeSH.Dsi.db 4 org.MeSH.Eco.K12.MG1655.db 3 org.MeSH.Cal.SC5314.db 4 org.MeSH.Sau.USA300FPR3757.db 5 org.MeSH.Ddi.AX4.db 4 org.MeSH.Lma.db 4 org.MeSH.Eco.O157.H7.TW14359.db 4 org.MeSH.Eco.O157.H7.Sakai.db 4 org.MeSH.Pae.PAO1.db 4 org.MeSH.Eco.UMN026.db 4 org.MeSH.Hsa.db 5 org.MeSH.Dgr.db 4 org.MeSH.Eco.APEC01.db 4 org.MeSH.Cel.db 4 org.MeSH.Ana.db 5 org.MeSH.Laf.db 4 org.MeSH.Sau.RF122.db 4 org.MeSH.Sau.ED98.db 5 org.MeSH.Tbr.9274.db 5 MeSH.db 25 org.MeSH.Sau.M013.db 4 org.MeSH.Sau.N315.db 4 org.MeSH.Aga.PEST.db 4 org.MeSH.Bsu.RONN1.db 4 org.MeSH.Dvi.db 5 org.MeSH.Sau.MRSA252.db 4 org.MeSH.Cja.db 5 pd.nugo.mm1a520177 26 MafDb.ALL.wgs.phase1.release.v3.20101123 15 dmdrosophila2dmrefseq 2 BSgenome.Mfuro.UCSC.musFur1 29 lumiHumanV1 2 illuminaHumanv1 2 mgu74av2 3 SNPlocs.Hsapiens.dbSNP141.GRCh38 19 pd.drogene.1.0.st 30 pd.rabgene.1.1.st 26 pd.hta.2.0 104 pd.chogene.2.0.st 30 pd.rcngene.1.0.st 24 pd.soygene.1.0.st 29 pd.guigene.1.1.st 33 pd.rusgene.1.0.st 25 pd.chogene.2.1.st 24 pd.rjpgene.1.0.st 30 mta10sttranscriptcluster.db 12 mouse4302 3 hs133phsentrezgcdf 2 hugene10st.db 2 dmdrosophila2dmensg7probe 1 illuminaMousev1p1 2 hs133phsenst7probe 1 hs95av2ptensg7probe 1 hs133xptensg7cdf 1 u133x3p 3 hsex10stv2ptensg7cdf 1 hs133xhsense7probe 1 mm430mmense 3 hwgcod 3 gahgu95av2 2 gahgu133plus2 2 gahgu133a 2 hs133pptensg7cdf 1 hs133phsug7probe 1 hs133bhsense7probe 2 hs133pptense7cdf 1 hs133bptense7probe 1 hsfocushsentrezgcdf 2 hs95av2ptensg7cdf 1 reactome.db 3514 pd.cyrgene.1.0.st 38 pd.cangene.1.1.st 36 hgu95acdf 149 TxDb.Hsapiens.UCSC.hg19.knownGene 4764 hgu133plus2probe 127 hugene10sttranscriptcluster.db 570 pd.rae230a 34 PFAM.db 621 rat2302probe 40 pd.rhegene.1.0.st 62 rattoxfxcdf 31 cMAP 63 illuminaHumanv3.db 250 primeviewcdf 70 hgu95eprobe 37 DO.db 1460 medicagoprobe 38 htrat230pmcdf 36 mu11ksubacdf 35 mu11ksubbcdf 36 SNPlocs.Hsapiens.dbSNP.20090506 27 ag.db 51 hgu95av2cdf 381 pd.ragene.2.0.st 35 rwgcod.db 38 hu35ksubb.db 46 hgu95av2probe 310 pd.felgene.1.1.st 37 MoExExonProbesetLocation 36 hom.Mm.inp.db 31 TxDb.Athaliana.BioMart.plantsmart14 6 pd.ath1.121501 37 mouse4302probe 45 pd.081229.hg18.promoter.medip.hx1 34 rae230aprobe 82 BSgenome.Ecoli.NCBI.20080805 150 pd.mirna.2.0 33 mouse.db0 73 pd.mogene.2.0.st 81 seqnames.db 11 MmAgilentDesign026655.db 49 Norway981.db 47 yeast2cdf 40 pd.2006.10.31.rn34.refseq.promoter 34 BSgenome.Btaurus.UCSC.bosTau4 47 nugomm1a520177probe 34 bovine.db 52 ricecdf 44 htratfocuscdf 37 ecoliprobe 37 celegans.db 71 FDb.UCSC.snp135common.hg19 36 BSgenome.Amellifera.BeeBase.assembly4 41 hu35ksubdcdf 36 gahgu95av2cdf 23 hgu95ccdf 39 mouse430a2.db 82 hugene20stprobeset.db 49 riceprobe 43 hu35ksubbcdf 35 BSgenome.Celegans.UCSC.ce6 48 PartheenMetaData.db 50 FDb.UCSC.tRNAs 113 hguDKFZ31.db 48 GGHumanMethCancerPanelv1.db 34 org.Pt.eg.db 287 test3cdf 40 xenopus.db0 54 hu6800subccdf 34 pd.ag 38 agcdf 37 test3probe 37 hu6800cdf 40 mgu74av2probe 37 xenopuslaevisprobe 38 ecoliasv2cdf 36 hivprtplus2cdf 35 org.Pf.plasmo.db 116 zebrafishcdf 42 ygs98probe 37 rgu34cprobe 38 mgu74c.db 48 hcg110probe 35 mi16cod.db 38 malaria.db0 56 hgu133plus2frmavecs 41 rgu34ccdf 34 rgu34acdf 38 PANTHER.db 199 BSgenome.Amellifera.UCSC.apiMel2 40 hgu133atagcdf 60 PolyPhen.Hsapiens.dbSNP131 109 pd.cotton 33 htmg430bcdf 32 pd.mogene.1.0.st.v1 91 ragene10stv1probe 35 mgu74aprobe 36 mgu74bprobe 38 saureuscdf 35 BSgenome.Mmulatta.UCSC.rheMac2 36 TxDb.Athaliana.BioMart.plantsmart10 10 mogene10stv1probe 37 celegansprobe 41 pd.genomewidesnp.5 170 xtropicaliscdf 33 TxDb.Mmusculus.UCSC.mm10.ensGene 130 gahgu95av2probe 26 BSgenome.Alyrata.JGI.v1 43 illuminaHumanv2BeadID.db 39 RaExExonProbesetLocation 40 citruscdf 36 hgu133bprobe 44 pd.equgene.1.1.st 42 pd.rg.u34c 34 pd.equgene.1.0.st 34 pig.db0 59 BSgenome.Mmusculus.UCSC.mm10 1178 test1cdf 34 pd.genomewidesnp.6 205 gahgu95e.db 23 pd.feinberg.hg18.me.hx1 40 soybeanprobe 37 SHDZ.db 48 rat2302cdf 55 TxDb.Rnorvegicus.UCSC.rn5.refGene 114 rat2302.db 82 fly.db0 63 rattoxfxprobe 33 yeast.db0 61 pd.cyngene.1.1.st 35 gahgu95ccdf 19 SNPlocs.Hsapiens.dbSNP.20120608 37 athhomology 3 ragene10sttranscriptcluster.db 50 pd.rat230.2 54 YEAST 3 hthgu133pluspmcdf 52 pd.mapping250k.sty 164 FDb.InfiniumMethylation.hg18 70 BSgenome.Rnorvegicus.UCSC.rn5 96 hgu95d.db 53 human610quadv1bCrlmm 62 nugomm1a520177cdf 31 pd.hg.u95a 120 pd.ht.hg.u133.plus.pm 45 mu19ksubb.db 47 humanomni25quadv1bCrlmm 23 pedbarrayv9.db 46 ecoliK12.db0 60 mgug4122a.db 49 BSgenome.Mmulatta.UCSC.rheMac3 33 ragene11sttranscriptcluster.db 51 hthgu133pluspmprobe 38 gahgu95dprobe 26 hu35ksubd.db 47 rgug4130a.db 49 pd.mg.u74a 34 pd.moe430b 33 gp53cdf 35 human370v1cCrlmm 152 m10kcod.db 39 humanomniexpress12v1bCrlmm 31 gahgu95dcdf 21 mgug4120a.db 47 hgug4100a.db 50 Mu15v1.db 49 illuminaHumanDASLBeadID.db 5 zebrafish.db 49 pd.x.laevis.2 37 mm24kresogen.db 33 hapmap370k 42 HuExExonProbesetLocationHg18 31 htrat230pmprobe 35 hgu133a 3 ag 3 hugene10stv1.r3cdf 1 GO 3 BSgenome.Btaurus.UCSC.bosTau6.masked 48 agahomology 3 BSgenome.Ggallus.UCSC.galGal4.masked 26 BSgenome.Tguttata.UCSC.taeGut1 27 BSgenome.Tguttata.UCSC.taeGut1.masked 25 BSgenome.Amellifera.UCSC.apiMel2.masked 28 illuminaHumanv3BeadID.db 5 BSgenome.Cfamiliaris.UCSC.canFam3.masked 29 ath1atrefseq 2 org.MeSH.Pab.db 4 org.MeSH.Vvi.db 4 org.MeSH.Pae.PA7.db 4 org.MeSH.Sau.MW2.db 4 org.MeSH.Eco.O26.H7.CB9615.db 4 org.MeSH.Tgo.ME49.db 4 org.MeSH.Eco.O157.H7.EC4115.db 4 org.MeSH.Eco.UTI89.db 4 org.MeSH.Eco.O26.H11.11368.db 4 org.MeSH.Eco.O157.H7.EDL933.db 4 org.MeSH.Eco.HS.db 5 org.MeSH.Aca.db 5 org.MeSH.Oni.db 4 pd.nugo.hs1a520180 28 org.MeSH.Sau.USA300TCH1516.db 4 org.MeSH.Spu.db 4 org.MeSH.Osa.db 4 org.MeSH.Zma.db 4 moex10stprobeset.db 41 org.MeSH.Dan.db 4 org.MeSH.Dmo.db 3 org.MeSH.Ame.db 4 org.MeSH.Eco.K12.DH10B.db 5 org.MeSH.Bfl.db 4 org.MeSH.Tgu.db 4 raex10sttranscriptcluster.db 42 mm74av1mmentrezgcdf 2 mouse430a2 2 BSgenome.Btaurus.UCSC.bosTau3.masked 30 humanomni258v1p1bCrlmm 2 illuminaHumanv1BeadID.db 9 illuminaHumanv2 2 illuminaMousev1BeadID.db 4 hs133aptentrezgprobe 2 cfcanine2cfenst7cdf 1 mogene10st.db 1 Hspec 24 pd.medgene.1.1.st 25 pd.margene.1.0.st 27 pd.medgene.1.0.st 29 pd.fingene.1.1.st 26 pd.rabgene.1.0.st 29 pd.chigene.1.0.st 26 hs133ahsentrezgcdf 2 TxDb.Rnorvegicus.BioMart.igis 27 hspeccdf 24 BSgenome.Rnorvegicus.UCSC.rn6 136 BSgenome.Dmelanogaster.UCSC.dm6 213 hs133ahsentrezg 2 hs133phsentrezg 2 org.Hs.sp.db 2 dmdrosophila2dmenst7cdf 1 hs133xhsensg7probe 1 dmdrosophila2dmense7probe 1 hs133bhsentrezg7probe 1 h20kcod 4 org.Rn.sp.db 4 rwgcod 3 adme16cod 3 gahgu95e 2 hs133pptense7probe 1 hs133phsrefseq7probe 1 hs133phsentrezg7cdf 1 lumiMouseV1 2 hgfocus 3 hsex10stv2hsrefseq 1 hsex10stv2hsrefseqprobe 1 dmgenome1dmenst7probe 1 dmgenome1dmensg7cdf 1 lumiHumanIDMapping.db 1 hgu95ecdf 37 hu6800.db 240 GO.db 23556 hgu133a.db 894 org.Hs.eg.db 19491 hgu95aprobe 41 hgu133plus2.db 1852 chickencdf 37 htmg430pmcdf 39 moe430aprobe 38 lumiRatAll.db 39 pd.mg.u74av2 36 ath1121501.db 82 barley1probe 38 pd.hugene.2.1.st 134 mirbase.db 190 sugarcanecdf 34 sugarcaneprobe 38 arabidopsis.db0 64 Mus.musculus 333 IlluminaHumanMethylation450k.db 33 pd.mogene.1.1.st.v1 53 mgu74cv2cdf 34 hugene10stv1cdf 124 chicken.db0 65 mu6500subdcdf 34 pd.rae230b 34 pd.hg.u95c 34 mgu74cprobe 37 illuminaHumanWGDASLv3.db 34 org.At.tair.db 805 pd.mirna.3.0 33 hgu95a.db 665 hu35ksubacdf 34 u133x3pcdf 41 lumiHumanIDMapping 109 hgu95av2 97 pd.yeast.2 33 mouse4302.db 212 gahgu133acdf 22 hthgu133aprobe 39 org.Dm.eg.db 1081 mgu74cv2probe 37 u133x3pprobe 37 pd.canine 35 org.Ss.eg.db 453 hu35ksubcprobe 38 lumiHumanAll.db 84 pd.s.aureus 35 ye6100subacdf 35 SNPlocs.Hsapiens.dbSNP.20110815 23 cyp450cdf 33 gahgu95ecdf 19 pd.hg.u95d 35 rgu34bcdf 35 targetscan.Mm.eg.db 38 rtu34.db 46 htmg430bprobe 36 caninecdf 37 pd.hg.u219 51 nugomm1a520177.db 36 BSgenome.Celegans.UCSC.ce10 75 rgu34bprobe 38 pd.mu11ksubb 35 pd.poplar 35 hgu133bcdf 66 hgu133a2cdf 109 hgu95dcdf 36 mogene11stprobeset.db 50 vitisviniferaprobe 39 org.Mmu.eg.db 510 org.EcSakai.eg.db 240 BSgenome.Athaliana.TAIR.04232008 42 pd.huex.1.0.st.v2 122 primeviewprobe 34 paeg1aprobe 35 illuminaHumanv1.db 72 pd.maize 34 illuminaHumanWGDASLv4.db 38 TxDb.Dmelanogaster.UCSC.dm3.ensGene 532 illuminaMousev1.db 42 Homo.sapiens 983 hgug4101a.db 47 rnu34cdf 36 wheatprobe 35 rgu34aprobe 36 ragene11stprobeset.db 47 pd.bovine 41 mgu74b.db 51 pd.x.tropicalis 36 pd.mirna.1.0 33 pd.mu11ksuba 35 BSgenome.Mmusculus.UCSC.mm8 93 mwgcod.db 42 hugene21sttranscriptcluster.db 51 saureusprobe 41 canine.db0 60 mirna10cdf 47 pd.ht.hg.u133a 39 pd.citrus 39 pd.raex.1.0.st.v1 42 zebrafish.db0 56 hs25kresogen.db 39 human1mduov3bCrlmm 32 u133x3p.db 59 TxDb.Athaliana.BioMart.plantsmart19 5 BSgenome.Ggallus.UCSC.galGal3 68 maizeprobe 37 pd.feinberg.mm8.me.hx1 37 IlluminaHumanMethylation450kprobe 38 hgug4110b.db 52 mogene10stv1cdf 62 hu35ksubdprobe 38 test2cdf 35 zebrafishprobe 41 humanCHRLOC 70 mouse430a2probe 39 pd.rn.u34 32 xenopuslaeviscdf 37 moe430b.db 49 hgfocusprobe 65 pd.moe430a 39 rae230bprobe 41 cottoncdf 36 humanomni1quadv1bCrlmm 30 indac.db 47 BSgenome.Cfamiliaris.UCSC.canFam3 59 mu6500subbcdf 37 ragene21sttranscriptcluster.db 41 rguatlas4k.db 46 pd.felgene.1.0.st 33 pd.porcine 36 mu6500subccdf 34 POCRCannotation.db 47 pd.ragene.2.1.st 35 rgug4105a.db 47 ri16cod.db 42 illuminaRatv1.db 40 pd.cyrgene.1.1.st 34 org.Hs.ipi.db 29 lumiRatIDMapping 36 genomewidesnp6Crlmm 178 BSgenome.Ggallus.UCSC.galGal4 36 ecoli2probe 35 humanLLMappings 3 ath1121501 3 pd.hugene.2.0.st 97 BSgenome.Athaliana.TAIR.01222004 9 Hs6UG171.db 47 IlluminaHumanMethylation450kannotation.ilmn.v1.2 4 BSgenome.Ptroglodytes.UCSC.panTro3 33 nugohs1a520180.db 37 mu19ksubc.db 47 gahgu95b.db 23 ecoli2.db 49 gahgu95c.db 24 hthgu133bcdf 37 LAPOINTE.db 48 hguqiagenv3.db 49 gahgu95d.db 23 hu35ksuba.db 48 human550v3bCrlmm 27 pd.mg.u74cv2 36 rae230b.db 48 TxDb.Athaliana.BioMart.plantsmart12 9 chicken.db 49 xlaevis2cdf 33 human660quadv1aCrlmm 27 gahgu133b.db 26 BSgenome.Hsapiens.UCSC.hg19.masked 159 hgu95e.db 48 ecoliSakai.db0 56 rat.db0 64 KEGGprofile 0 cottonprobe 39 BSgenome.Dmelanogaster.FlyBase.r51 2 BSgenome.Ptroglodytes.UCSC.panTro3.masked 24 BSgenome.Hsapiens.NCBI.GRCh38 673 BSgenome.Btaurus.UCSC.bosTau4.masked 28 BSgenome.Sscrofa.UCSC.susScr3.masked 29 BSgenome.Cfamiliaris.UCSC.canFam2.masked 27 BSgenome.Drerio.UCSC.danRer6.masked 25 BSgenome.Hsapiens.UCSC.hg17.masked 37 BSgenome.Dmelanogaster.UCSC.dm3.masked 28 BSgenome.Hsapiens.UCSC.hg18.masked 56 celegans 3 KEGG 3 hgu133plus2 3 org.MeSH.Eco.O103.H2.12009.db 4 org.MeSH.Nle.db 5 org.MeSH.Sce.S288c.db 4 org.MeSH.Eco.IAI1.db 4 org.MeSH.Oan.db 5 org.MeSH.Eco.B.REL606.db 4 org.MeSH.Xtr.db 4 org.MeSH.Bsu.W23.db 4 org.MeSH.Cre.db 4 org.MeSH.Eco.KO11FL.db 4 moex10sttranscriptcluster.db 39 org.MeSH.Eco.O127.H6.E2348.69.db 4 org.MeSH.Dre.db 4 org.MeSH.Mes.db 4 org.MeSH.Cpo.db 5 org.MeSH.Eco.BW2952.db 5 org.MeSH.Ath.db 4 org.MeSH.Mdo.db 4 org.MeSH.Eco.ED1a.db 4 org.MeSH.Dme.db 4 org.MeSH.Sau.Mu50.db 4 org.MeSH.Ssc.db 4 org.MeSH.Xla.db 4 org.MeSH.Mga.db 4 org.MeSH.Gga.db 4 org.MeSH.Eco.CFT073.db 4 org.MeSH.Eco.S88.db 4 org.MeSH.Dse.db 4 org.MeSH.Spo.972h.db 3 org.MeSH.Eco.IAI39.db 5 org.MeSH.Dpe.db 4 org.MeSH.Sco.A32.db 4 org.MeSH.Eco.O111.H.11128.db 4 org.MeSH.Aml.db 5 org.MeSH.Sil.db 4 org.MeSH.Pto.db 5 org.MeSH.Pae.LESB58.db 5 org.MeSH.Sau.VC40.db 4 org.MeSH.Sau.MSHR1132.db 4 org.MeSH.Sau.Newman.db 5 org.MeSH.Sau.Mu3.db 4 org.MeSH.Sau.MSSA476.db 4 BSgenome.Drerio.UCSC.danRer5.masked 26 Masks.Dmelanogaster.UCSC.dm3 7 illuminaMousev1 2 lumiHumanV2 2 TxDb.Scerevisiae.UCSC.sacCer2.ensGene 1 TxDb.Hsapiens.BioMart.igis 27 cfcanine2cfensg7cdf 1 TxDb.Athaliana.BioMart.plantsmart22 148 pd.fingene.1.0.st 33 pd.margene.1.1.st 26 pd.mirna.4.0 39 pd.drogene.1.1.st 26 miRNAtap.db 104 mgug4122a 3 hs133ahsensgcdf 2 hgu95e 3 hvuhomology 3 TxDb.Mmusculus.BioMart.igis 0 gahgu133b 2 gahgu95b 2 gahgu95c 2 illuminaHumanv3ProbeID.db 2 rat2302 4 atgenomeattigr7probe 1 hs133bptensg7probe 1 hgu95a 3 atgenomeattigr7cdf 1 hs133bhsense7cdf 1 dmgenome1dmrefseq7probe 1 hs95av2hsense 2 hgu133a2 3 hs133aptense7probe 1 MeSH.Syn.eg.db 20 MeSH.Aca.eg.db 18 hi16cod 3 MeSH.Pae.PAO1.eg.db 17 MafDb.ExAC.r0.3.sites 11 MeSH.Ath.eg.db 17 MeSH.Eqc.eg.db 16 MeSH.Sau.COL.eg.db 0 MeSH.Dre.eg.db 16 MeSH.Pfa.3D7.eg.db 15 MeSH.Spo.972h.eg.db 12 MeSH.Eco.UMN026.eg.db 17 MeSH.Eco.O103.H2.12009.eg.db 0 MafDb.ESP6500SI.V2.SSA137 12 MeSH.Eco.K12.DH10B.eg.db 11 MeSH.Sau.USA300FPR3757.eg.db 0 MeSH.Dsi.eg.db 17 MeSH.Eco.KO11FL.eg.db 0 MeSH.Dvi.eg.db 17 MeSH.Mml.eg.db 18 MeSH.Eco.ED1a.eg.db 15 MeSH.Laf.eg.db 17 MeSH.Dda.3937.eg.db 16 MeSH.Tbr.9274.eg.db 18 MeSH.Tgu.eg.db 17 MeSH.Eco.O26.H7.CB9615.eg.db 0 MeSH.Sil.eg.db 15 MeSH.Xla.eg.db 17 MeSH.Eco.IAI1.eg.db 11 MeSH.Eco.E24377A.eg.db 0 MeSH.Dmo.eg.db 16 MeSH.Eco.IAI39.eg.db 17 MeSH.Pae.LESB58.eg.db 0 MeSH.Dan.eg.db 16 SNPlocs.Hsapiens.dbSNP142.GRCh37 19 MeSH.Ocu.eg.db 17 EnsDb.Rnorvegicus.v79 112 MeSH.Pto.eg.db 16 MeSH.Dse.eg.db 16 MeSH.Cbr.eg.db 18 pd.rta.1.0 58 BSgenome.Mfascicularis.NCBI.5.0 53 SNPlocs.Hsapiens.dbSNP144.GRCh38 407 xtrhomology 2 mi16cod 3 scop.db 2 hsfocushsense 2 drzebrafishdrenstprobe 2 hgug4100a 4 rn230brnentrezgprobe 2 btbovinebtensg 2 btbovinebtenst 2 btbovinebtenstprobe 2 btbovinebtrefseqcdf 2 btbovinebtrefseqprobe 2 cfahomology 3 cfcanine2cfense 2 cfcanine2cfensg 2 cfcanine2cfenstprobe 2 cfcanine2cfentrezg 2 cfcanine2cfentrezgprobe 2 cfcanine2cfrefseqcdf 2 cfcanine2cfugcdf 2 cfcanine2cfugprobe 2 dmdrosophila2dmense 2 dmdrosophila2dmrefseqcdf 2 dmdrosophila2dmrefseqprobe 2 dmgenome1dmense 2 dmgenome1dmensg 2 dmgenome1dmenst 2 dmgenome1dmugcdf 2 drzebrafishdrensgprobe 2 egohomology 3 ggchickenggensgcdf 2 ggchickenggensgprobe 2 ggchickenggenstcdf 2 ggchickenggentrezg 2 ggchickenggentrezgprobe 1 ggchickenggug 2 drzebrafishdrentrezgprobe 2 drzebrafishdrugcdf 2 drzebrafishdrugprobe 2 hgu95b 3 hgu95c 4 hgu95d 3 hguDKFZ31 3 hguqiagenv3 4 hs133ahsenstcdf 2 hs133ahsrefseqcdf 2 hs133ahsugprobe 3 hs133ahsvegaeprobe 1 hs133aptensgcdf 2 hs133aptentrezg 2 hs133av2hsense 2 hs133av2hsenseprobe 3 hs133av2hsenstprobe 2 hs133av2hsentrezgcdf 2 hs133av2hsug 2 hs133av2hsugprobe 2 hs133av2hsvegaeprobe 1 hs133av2hsvegagcdf 1 hs133av2ptensg 2 hs133av2ptensgcdf 2 hs133av2ptenst 2 hs133av2ptrefseqcdf 2 hs133bhsense 2 hs133bhsenseprobe 2 hs133bhsugprobe 2 hs133bptenseprobe 2 hs133bptentrezg 3 hs133phsense 2 hs133phsenseprobe 2 hs133phsrefseq 2 hs133phsrefseqprobe 2 hs133phsvegatcdf 1 pedbarrayv10 2 PFAM 3 r10kcod 4 rae230b 4 rgu34c 4 rguatlas4k 3 rn230arnrefseq 2 rn230brnenstcdf 2 rn230brnentrezg 2 rn230brnrefseq 3 rn230rnensecdf 2 rn230rnentrezg 3 rn230rnentrezgprobe 2 rn230rnugcdf 2 rn230rnugprobe 2 rn34arnenseprobe 2 rn34arnentrezgprobe 2 rn34arnrefseq 2 SHDZ 3 BSgenome.Dmelanogaster.BDGP.Release5 1 mmex10stv1mmrefseq 1 mmuhomology 4 mouseLLMappings 3 dmdrosophila2dmug7probe 1 dmgenome1dmense7cdf 1 dmgenome1dmug7cdf 1 drzebrafishdrense7probe 1 drzebrafishdrenst7cdf 1 hs133pptensecdf 2 hs133pptenseprobe 3 hs133pptensg 2 hs133pptensgprobe 2 hs133pptrefseqcdf 3 hs133xhsenseprobe 2 hs133xhsenstprobe 3 hs133xhsentrezgprobe 2 hs133xhsvegae 1 hs133xhsvegagcdf 1 hs133xhsvegat 2 hs133xhsvegatprobe 2 hs133xptensgprobe 2 hs95av2hsensg 3 hs95av2hsenstcdf 2 hs95av2hsentrezg 2 hs95av2hsrefseqcdf 3 hs95av2hsug 2 hs95av2hsvegagprobe 1 hs95av2hsvegat 1 hs95av2hsvegatcdf 2 hs95av2ptrefseqprobe 2 hs95av2ptensg 2 hs95av2ptensgcdf 2 hs95av2ptensgprobe 2 hs95av2ptenst 2 hs95av2ptenstcdf 2 hs95av2ptenstprobe 2 hsfocushsensecdf 2 hsfocushsugcdf 2 hsfocushsvegatcdf 2 hsfocusptrefseqprobe 1 indac 4 mamurhesusmamuensecdf 3 mamurhesusmamuensgcdf 1 mamurhesusmamuensgprobe 1 mamurhesusmamuenst 2 mm11ksubammentrezg 2 mm11ksubammentrezgprobe 2 mm11ksubammrefseq 2 mm11ksubammrefseqprobe 2 mm11ksubammug 2 mm11ksubammvegag 2 mm11ksubammvegatcdf 1 mm11ksubbmmentrezgprobe 2 mm430a2mmensg 2 mm430a2mmug 1 mm430a2mmugcdf 2 mm430a2mmvegae 2 mm430a2mmvegaeprobe 2 mm430ammensgprobe 2 mm430ammenst 2 mm430ammentrezg 2 mm430ammentrezgcdf 2 mm430ammugcdf 3 mm430ammvegaecdf 2 mm430ammvegaeprobe 1 mm430bmmenseprobe 2 mm430bmmensgprobe 3 mm430bmmenst 3 mm430bmmug 3 mm430bmmvegagprobe 2 mm430mmensecdf 2 mm430mmenseprobe 2 mm430mmensg 3 mm430mmensgcdf 3 mm430mmenstprobe 2 mm430mmentrezgcdf 4 mm430mmrefseqcdf 2 mm430mmrefseqprobe 2 mm430mmugcdf 3 mm430mmvegae 2 mm430mmvegagprobe 1 mm74av1mmense 3 mm74av1mmrefseq 3 mm74av1mmugprobe 3 mm74av1mmvegat 2 mm74av2mmensecdf 3 mm74av2mmentrezg 3 mm74av2mmrefseqprobe 2 mm74av2mmugcdf 2 mm74av2mmvegagprobe 2 mm74bv2mmenseprobe 2 mm74bv2mmensg 3 mm74bv2mmensgcdf 2 mm74bv2mmensgprobe 2 mm74bv2mmentrezgcdf 2 mm74bv2mmentrezgprobe 2 mm74bv2mmrefseqprobe 2 mm74bv2mmug 2 mm74bv2mmugprobe 2 mm74bv2mmvegag 2 mm74cv2mmense 2 mm74cv2mmensecdf 2 mm74cv2mmenst 2 mm74cv2mmentrezg 2 mm74cv2mmvegag 1 mm74cv2mmvegagprobe 2 mm74cv2mmvegat 1 mwgcod 4 Norway981 3 hs133av2hsense7probe 1 hs133av2hsensg7probe 1 hs133av2hsenst7cdf 1 hs133ahsrefseq7probe 1 hs133av2hsentrezg7probe 1 hs133av2ptense7cdf 1 hs133av2ptensg7probe 1 hs133phsenst7cdf 1 hs133phsentrezg7probe 1 hs133pptensg7probe 1 hs133xhsense7cdf 1 hs133xhsenst7probe 1 hs133xhsentrezg7probe 1 hs133xhsug7probe 1 hs133xptensg7probe 1 hs95av2hsug7probe 1 hs95av2ptense7cdf 1 hsex10stv2hsense7cdf 1 hsex10stv2hsenst7cdf 1 hsex10stv2hsrefseq7cdf 1 hsex10stv2hsug7cdf 2 hsfocushsense7probe 1 hsfocushsensg7probe 1 hsfocushsrefseq7cdf 1 hsfocushsrefseq7probe 1 hsfocushsug7probe 1 hsfocusptense7probe 1 CelegansGenome.ce2 1 cfcanine2cfensg7probe 1 cfcanine2cfenst7probe 1 drzebrafishdrug7cdf 1 ggchickenggensg7cdf 1 ggchickenggenst7probe 1 hs133ahsenst7cdf 1 hs133ahsug7probe 1 BSgenome.Mmusculus.UCSC.mm7 2 atgenomeattigr 1 atgenomeattigrprobe 1 ath1attigr 1 ath1attigrcdf 1 vvgrapevvtigrcdf 1 mm11ksubammense7probe 1 mm11ksubammensg7cdf 2 mm11ksubbmmensg7cdf 1 mm11ksubbmmenst7probe 1 mm11ksubbmmentrezg7probe 1 mm11ksubbmmrefseq7probe 1 mm430ammenst7cdf 2 mm430ammrefseq7cdf 1 mm430bmmensg7probe 1 mm430bmmentrezg7cdf 1 mm430mmensg7cdf 2 mm430mmentrezg7cdf 1 mm74av1mmenst7probe 1 mm74av1mmrefseq7probe 2 mm74av1mmug7cdf 1 mm74av2mmense7cdf 2 mm74av2mmenst7cdf 1 mmex10stv1mmense7cdf 1 mmex10stv1mmrefseq7cdf 1 mmex10stv1mmrefseq7probe 1 HsapiensGenome.hg16 1 mmex10stv1mmensecdf 1 hsex10stv2ptensgprobe 1 hsex10stv2ptentrezgprobe 1 osriceostigrcdf 2 phastCons100way.UCSC.hg38 121 MafDb.ALL.wgs.phase3.release.v5b.20130502 11 rn230rnenst7cdf 2 rnex10stv1rnense7probe 1 rn230arnrefseq7cdf 1 org.Hs.ref.db 5 BSgenome.Drerio.UCSC.danRer10 105 ScerevisiaeGenome.sacCer1 1 rnex10stv1rnug7cdf 1 rn34arnenst7probe 1 rn230rnense7cdf 1 rn230brnug7probe 1 rn230brnenst7cdf 1 rn34arnensg7probe 1 rn230rnrefseq7probe 1 rn230brnrefseq7probe 1 rn230rnentrezg7cdf 2 mm430a2mmenstprobe 1 hsex10stv2hsensecdf 1 hsex10stv2hsensg 1 hsex10stv2hsensgcdf 1 hsex10stv2hsentrezg 1 hsex10stv2hsentrezgcdf 1 hsex10stv2hsugcdf 1 rnex10stv1rnenstcdf 2 rnex10stv1rnenstprobe 1 rnex10stv1rnentrezgprobe 1 rnex10stv1rnug 1 sc.dbsubloc.db 3 dName.db 3 int.mppi.db 1 MeSH.Eco.APEC01.eg.db 0 MeSH.Bsu.Bsn5.eg.db 0 hcgi12k 1 BSgenome.Hsapiens.UCSC.hg38 4000 BSgenome.Btaurus.UCSC.bosTau8 31 LowMACAAnnotation 27 h10kcod 3 phastCons7way.UCSC.hg38 57 MafDb.ALL.wgs.phase3.release.v5a.20130502 11 MeSH.Bsu.TUB10.eg.db 11 MeSH.Eco.O26.H11.11368.eg.db 0 MeSH.Miy.eg.db 17 MeSH.Eco.O157.H7.EDL933.eg.db 11 MeSH.Sau.MW2.eg.db 0 MeSH.Oni.eg.db 16 MeSH.Eco.O157.H7.TW14359.eg.db 0 MeSH.Cfa.eg.db 17 MeSH.Cre.eg.db 16 MeSH.Tgo.ME49.eg.db 16 MeSH.Bsu.RONN1.eg.db 0 MeSH.Eco.SMS35.eg.db 0 MeSH.Bsu.W23.eg.db 0 MeSH.Dya.eg.db 16 MeSH.Sau.Mu3.eg.db 0 MeSH.Sce.S288c.eg.db 17 MeSH.Bfl.eg.db 17 MeSH.Oan.eg.db 17 MeSH.Mdo.eg.db 17 MeSH.Ame.eg.db 19 MeSH.Ani.FGSC.eg.db 17 MeSH.Mmu.eg.db 19 MeSH.Eco.S88.eg.db 11 EnsDb.Hsapiens.v79 312 TxDb.Athaliana.BioMart.plantsmart25 26 EnsDb.Rnorvegicus.v75 33 MeSH.Dme.eg.db 18 MeSH.Eco.CFT073.eg.db 11 MeSH.Eco.HS.eg.db 11 SNPlocs.Hsapiens.dbSNP144.GRCh37 802 hsfocusptensgcdf 2 rn230arnensgcdf 2 hsfocusptenst 2 mgrhomology 2 hsfocusptenstcdf 3 hsfocushsensg 2 btbovinebtensecdf 2 btbovinebtentrezgcdf 2 btbovinebtrefseq 2 cfcanine2cfensecdf 2 cfcanine2cfenseprobe 2 cfcanine2cfensgcdf 2 cfcanine2cfenst 2 cfcanine2cfenstcdf 2 cfcanine2cfentrezgcdf 2 chicken 2 dmdrosophila2dmensgcdf 2 dmdrosophila2dmenstcdf 2 dmdrosophila2dmenstprobe 2 dmgenome1dmensecdf 2 dmgenome1dmenstcdf 2 dmgenome1dmug 2 drzebrafishdrensg 2 drzebrafishdrenst 2 drzebrafishdrenstcdf 2 ggchickenggenseprobe 2 ggchickenggenst 2 ggchickenggrefseqcdf 2 ggchickenggrefseqprobe 1 ggchickenggugprobe 2 hcg110 3 drzebrafishdrentrezgcdf 2 drzebrafishdrrefseqprobe 2 drzebrafishdrvegatcdf 2 drzebrafishdrvegatprobe 1 hgubeta7 3 hgug4101a 4 hgug4110b 4 hgug4112a 3 hs133ahsensg 3 hs133ahsenstprobe 2 hs133ahsrefseq 2 hs133ahsvegae 2 hs133ahsvegag 1 hs133ahsvegagcdf 1 hs133ahsvegatprobe 2 hs133aptense 3 hs133aptensecdf 2 hs133aptenseprobe 3 hs133aptenst 2 hs133aptentrezgcdf 2 hs133aptrefseq 2 hs133aptrefseqprobe 1 hs133av2hsensecdf 2 hs133av2hsensgcdf 2 hs133av2hsensgprobe 2 hs133av2hsrefseq 2 hs133av2hsvegaecdf 1 hs133av2hsvegatprobe 2 hs133av2ptensecdf 2 hs133av2ptenseprobe 2 hs133av2ptenstcdf 2 hs133av2ptentrezg 2 hs133bhsenstprobe 3 hs133bhsvegaeprobe 2 hs133bhsvegag 1 hs133bhsvegagcdf 2 hs133bhsvegatcdf 2 hs133bhsvegatprobe 1 hs133bptense 2 hs133bptensg 3 hs133bptenst 2 hs133bptenstcdf 3 hs133bptentrezgcdf 2 hs133bptrefseqcdf 2 hs133phsensecdf 2 hs133phsenstcdf 2 hs133phsentrezgprobe 2 hs133phsrefseqcdf 2 hs133phsugprobe 2 hs133phsvegagcdf 2 hs133phsvegagprobe 1 pfahomology 3 rn230arnense 3 rn230arnenseprobe 3 rn230arnentrezgcdf 3 rn230arnug 3 rn230arnugcdf 2 rn230brnensecdf 3 rn230brnensg 3 rn230brnentrezgcdf 2 rn230brnug 3 rn230rnense 2 rn230rnenseprobe 2 rn230rnensg 3 rn230rnensgcdf 2 rn230rnenstcdf 3 rn230rnrefseqcdf 3 rn34arnense 2 rn34arnentrezg 2 rn34arnrefseqprobe 2 spohomology 3 atgenomeatrefseqcdf 2 atgenomeattairprobe 2 mmex10stv1mmensgprobe 1 mmex10stv1mmenstcdf 1 mmex10stv1mmrefseqcdf 1 mmex10stv1mmrefseqprobe 1 mmex10stv1mmugcdf 1 mu11ksuba 3 mu11ksubb 3 mu19ksuba 3 dmdrosophila2dmensg7cdf 1 dmdrosophila2dmrefseq7probe 1 cfcanine2cfug7probe 1 DmelanogasterGenome.dm2 1 drzebrafishdrensg7probe 1 hs133phsvegatprobe 1 hs133pptentrezg 2 hs133pptentrezgcdf 2 hs133pptrefseqprobe 1 hs133xhsensg 2 hs133xhsensgprobe 2 hs133xhsenst 2 hs133xhsenstcdf 2 hs133xhsentrezg 3 hs133xhsentrezgcdf 2 hs133xhsrefseq 2 hs133xhsrefseqprobe 2 hs133xhsugcdf 2 hs133xhsugprobe 2 hs133xptensg 2 hs133xptensgcdf 3 hs133xptenst 2 hs133xptenseprobe 2 hs133xptenstcdf 3 hs133xptentrezg 3 hs95av2hsenst 2 hs95av2hsenstprobe 2 hs95av2hsugcdf 3 hs95av2hsugprobe 2 hs95av2hsvegae 2 hs95av2hsvegaeprobe 1 hs95av2hsvegag 2 hs95av2hsvegagcdf 2 hs95av2hsvegatprobe 2 hs95av2ptensecdf 2 hs95av2ptenseprobe 2 hs95av2ptrefseq 2 hs95av2ptrefseqcdf 2 hsfocushsensgcdf 2 hsfocushsentrezgprobe 2 hsfocushsugprobe 2 hsfocusptentrezgprobe 2 hsfocusptrefseqcdf 2 hu35ksubd 4 HuO22 3 mamurhesusmamuenstcdf 2 mamurhesusmamuenstprobe 1 mamurhesusmamuentrezg 1 mamurhesusmamuentrezgprobe 1 mgu74a 4 mgu74b 4 mgu74cv2 3 mm11ksubammense 1 mm11ksubammensg 1 mm11ksubammenst 2 mm11ksubammenstprobe 3 mm11ksubammvegat 1 mm11ksubbmmense 2 mm11ksubbmmenseprobe 2 mm11ksubbmmensg 2 mm11ksubbmmenstprobe 2 mm11ksubbmmentrezg 2 mm11ksubbmmrefseq 3 mm11ksubbmmugprobe 2 mm11ksubbmmvegaeprobe 1 mm11ksubbmmvegatprobe 2 mm430a2mmense 1 mm430a2mmensgprobe 1 mm430a2mmentrezgprobe 1 mm430a2mmrefseqcdf 1 mm430a2mmvegag 1 mm430a2mmvegagprobe 2 mm430a2mmvegat 1 mm430ammense 3 mm430ammensg 2 mm430ammensgcdf 2 mm430ammentrezgprobe 2 mm430ammug 3 mm430ammvegag 2 mm430ammvegat 2 mm430ammvegatprobe 1 mm430bmmensg 2 mm430bmmentrezg 2 mm430bmmentrezgprobe 2 mm430bmmrefseq 3 mm430bmmvegae 2 mm430bmmvegaeprobe 1 mm430bmmvegatcdf 1 mm430mmensgprobe 2 mm430mmenst 2 mm430mmentrezg 2 mm430mmrefseq 3 mm430mmug 2 mm430mmugprobe 3 mm430mmvegaecdf 2 mm430mmvegaeprobe 1 mm430mmvegag 2 mm74av1mmenseprobe 2 mm74av1mmenst 2 mm74av1mmvegagcdf 2 mm74av1mmvegagprobe 1 mm74av1mmvegatprobe 2 mm74av2mmense 3 mm74av2mmensg 3 mm74av2mmrefseqcdf 2 mm74av2mmvegae 2 mm74av2mmvegatcdf 2 mm74bv2mmensecdf 2 mm74bv2mmvegae 2 mm74bv2mmvegagprobe 2 mm74bv2mmvegatprobe 1 mm74cv2mmenstcdf 2 mm74cv2mmenstprobe 2 mm74cv2mmentrezgprobe 2 mm74cv2mmrefseqcdf 2 mm74cv2mmug 2 mm74cv2mmvegaecdf 1 mm74cv2mmvegaeprobe 1 mm74cv2mmvegatcdf 2 Mu15v1 2 mu19ksubc 3 Mu22v3 2 omyhomology 3 osahomology 3 osriceosrefseqcdf 2 hs133av2ptense7probe 1 hs133bhsensg7cdf 1 hs133bhsensg7probe 1 hs133bhsenst7probe 2 hs133bhsug7cdf 1 hs133bptense7cdf 2 hs133xhsensg7cdf 2 hs133xhsentrezg7cdf 1 hs133xhsrefseq7cdf 1 hs95av2hsense7cdf 2 hs95av2hsensg7probe 1 hs95av2ptense7probe 1 HsapiensGenome.hg18 2 hsex10stv2ptense7cdf 1 hsex10stv2ptense7probe 1 hsfocushsense7cdf 1 hsfocushsentrezg7probe 1 hsfocusptensg7probe 1 atgenomeatrefseq7cdf 1 ath1atrefseq7cdf 1 ath1atrefseq7probe 1 ath1attigr7probe 1 cfcanine2cfense7probe 1 cfcanine2cfentrezg7cdf 1 cfcanine2cfrefseq7probe 1 drzebrafishdrrefseq7probe 1 drzebrafishdrug7probe 1 ggchickenggense7probe 1 ggchickenggug7cdf 1 hs133ahsense7probe 1 hs133ahsensg7cdf 1 hs133aptensg7cdf 1 vvgrapevvtigr7cdf 1 atgenomeattigrcdf 1 ath1attigrprobe 1 mm11ksubammentrezg7probe 1 mm11ksubammug7probe 1 mm11ksubbmmenst7cdf 1 mm430ammensg7cdf 1 mm430ammensg7probe 1 mm430ammentrezg7probe 1 mm430bmmentrezg7probe 1 mm430bmmug7probe 1 mm430mmense7probe 1 mm430mmensg7probe 2 mm430mmenst7probe 1 mm74av1mmensg7probe 1 mm74av1mmentrezg7cdf 1 mm74av1mmrefseq7cdf 1 mm74av2mmentrezg7cdf 1 mm74av2mmentrezg7probe 1 mm74av2mmrefseq7probe 1 mm74av2mmug7probe 1 mmex10stv1mmenst7probe 1 mmex10stv1mmug7cdf 2 hsex10stv2hsugprobe 1 mmex10stv1mmenseprobe 1 mmex10stv1mmensgcdf 1 hsex10stv2ptenseprobe 2 osriceostigrprobe 2 rn230rnense7probe 1 rn230brnensg7cdf 1 org.Mm.ref.db 2 mamurhesusmamurefseqcdf 1 rn34arnensg7cdf 1 rn34arnentrezg7probe 1 prt440scdf 1 BSgenome.Tguttata.UCSC.taeGut2 25 greengenes13.5MgDb 7 rnex10stv1rnrefseq7cdf 1 rn34arnentrezg7cdf 1 rn230brnrefseq7cdf 1 rnex10stv1rnug7probe 1 rnex10stv1rnensg7cdf 1 rn230brnug7cdf 1 rn230arnentrezg7probe 1 rn230arnenst7cdf 1 rn230arnensg7probe 1 rn230arnug7probe 1 prt440acdf 2 mm430a2mmenstcdf 1 mm430a2mmenst 1 hsex10stv2hsensgprobe 1 hsex10stv2hsenst 2 hsex10stv2hsenstcdf 1 rnex10stv1rnense 2 rnex10stv1rnenseprobe 2 rnex10stv1rnensg 1 rnex10stv1rnensgprobe 2 rnex10stv1rnentrezgcdf 1 rnex10stv1rnrefseqcdf 2 rnex10stv1rnugprobe 1 illuminaHumanv1ProbeID.db 2 illuminaMousev1ProbeID.db 1 int.domine.db 4 org.Mm.ipi.db 2 org.Rn.cross.db 2 MeSH.Eco.SE11.eg.db 0 MeSH.Bsu.168.eg.db 19 EnsDb.Hsapiens.v75 818 MeSH.Vvi.eg.db 17 MeSH.Ptr.eg.db 19 MeSH.Bta.eg.db 16 MeSH.Pae.PA14.eg.db 0 MeSH.Sau.USA300TCH1516.eg.db 10 MeSH.Gga.eg.db 16 MeSH.Eco.55989.eg.db 16 MeSH.Mes.eg.db 15 MeSH.Mga.eg.db 18 MeSH.Sau.RF122.eg.db 0 MeSH.Xtr.eg.db 18 MeSH.Cin.eg.db 18 MeSH.Gma.eg.db 17 MeSH.Rno.eg.db 18 MeSH.Lma.eg.db 17 MeSH.Eco.O157.H7.EC4115.eg.db 0 MeSH.Cpo.eg.db 18 MeSH.Ana.eg.db 16 MeSH.Aga.PEST.eg.db 17 MeSH.Eco.BW2952.eg.db 0 MeSH.Sau.N315.eg.db 0 MeSH.Aml.eg.db 17 MeSH.Eco.O127.H6.E2348.69.eg.db 11 hta20sttranscriptcluster.db 11 hta20stprobeset.db 10 pd.mta.1.0 43 MeSH.Pae.PA7.eg.db 0 EnsDb.Mmusculus.v79 711 MeSH.Nle.eg.db 17 grasp2db 68 XtraSNPlocs.Hsapiens.dbSNP144.GRCh38 80 sschomology 3 hsfocushsvegat 1 ggchickenggenstprobe 2 ptrhomology 4 btbovinebtenstcdf 2 dmdrosophila2dmenst 2 hsfocushsenst 2 hsfocusptrefseq 2 mm430bmmensgcdf 2 mm430bmmrefseqcdf 3 mm74av1mmugcdf 3 btbovinebtense 2 btbovinebtentrezg 2 btbovinebtentrezgprobe 1 canine2 2 cfcanine2cfvegatprobe 1 cfcanine2cfrefseq 2 cfcanine2cfrefseqprobe 2 cinhomology 2 dmdrosophila2dmugprobe 2 dmgenome1dmenseprobe 2 dmgenome1dmensgprobe 2 dmgenome1dmrefseqprobe 1 drehomology 3 drzebrafishdrensgcdf 2 ggchickenggense 2 ggchickenggensecdf 2 ggchickenggugcdf 2 hcgi8k 1 drzebrafishdrentrezg 2 drzebrafishdrrefseqcdf 2 hs133ahsenseprobe 2 hs133ahsensgprobe 2 hs133ahsentrezgprobe 2 hs133ahsrefseqprobe 3 hs133ahsvegaecdf 2 hs133ahsvegagprobe 1 hs133ahsvegat 1 hs133aptensgprobe 3 hs133aptenstprobe 3 hs133aptrefseqcdf 1 hs133av2hsensg 2 hs133av2hsenst 2 hs133av2hsentrezgprobe 2 hs133av2hsvegagprobe 2 hs133av2hsvegat 2 hs133av2ptense 2 hs133av2ptentrezgcdf 2 hs133av2ptrefseq 1 hs133av2ptrefseqprobe 2 hs133bhsensg 3 hs133bhsensgcdf 3 hs133bhsenst 2 hs133bhsentrezg 3 hs133bhsrefseq 2 hs133bhsrefseqcdf 3 hs133bhsrefseqprobe 3 hs133bhsug 2 hs133bhsugcdf 2 hs133bptenstprobe 2 hs133bptrefseq 2 hs133bptrefseqprobe 2 hs133phsensgprobe 2 hs133phsenst 2 hs133phsenstprobe 2 hs133phsug 2 hs133phsugcdf 2 hs133phsvegae 2 pedbarrayv9 3 ratLLMappings 3 rgu34b 4 ri16cod 3 rn230arnensecdf 2 rn230arnensg 2 rn230arnrefseqcdf 2 rn230arnrefseqprobe 2 rn230arnugprobe 2 rn230brnense 2 rn230brnenst 3 rn230brnenstprobe 2 rn230brnrefseqcdf 2 rn230rnensgprobe 2 rn230rnenst 2 rn34arnensecdf 2 rn34arnensgcdf 3 rn34arnenstprobe 2 rn34arnrefseqcdf 2 rn34arnugcdf 2 rn34arnugprobe 2 rnohomology 3 Roberts2005Annotation 2 rtu34 4 scehomology 3 atgenomeattair 2 atgenomeattaircdf 2 ath1atrefseqcdf 2 ath1atrefseqprobe 2 mmex10stv1mmenst 1 mmex10stv1mmentrezgprobe 1 moe430a 3 moe430b 3 dmdrosophila2dmense7cdf 1 dmdrosophila2dmenst7probe 1 dmdrosophila2dmug7cdf 1 dmgenome1dmense7probe 1 dmgenome1dmrefseq7cdf 1 dmgenome1dmug7probe 1 drzebrafishdrense7cdf 1 drzebrafishdrensg7cdf 1 drzebrafishdrenst7probe 1 drzebrafishdrentrezg7cdf 1 drzebrafishdrentrezg7probe 1 drzebrafishdrrefseq7cdf 1 hs133pptense 2 hs133pptensgcdf 2 hs133pptenstprobe 2 hs133pptentrezgprobe 2 hs133pptrefseq 2 hs133xhsense 3 hs133xhsrefseqcdf 2 hs133xhsvegaecdf 2 hs133xhsvegaeprobe 1 hs133xhsvegag 1 hs133xptense 2 hs133xptensecdf 2 hs133xptentrezgprobe 3 hs133xptrefseq 2 hs133xptrefseqprobe 2 hs95av2hsensecdf 2 hs95av2hsensgcdf 2 hs95av2hsensgprobe 2 hs95av2hsrefseqprobe 2 hs95av2hsvegaecdf 2 hs95av2ptense 2 hs95av2ptentrezgcdf 3 hs95av2ptentrezg 2 hsfocushsentrezg 2 hsfocushsrefseqprobe 2 hsfocushsug 2 hsfocushsvegaeprobe 1 hsfocushsvegagprobe 1 hsfocushsvegatprobe 1 hsfocusptense 2 hsfocusptensecdf 2 hsfocusptenseprobe 2 hsfocusptentrezg 2 hu35ksubb 4 hu35ksubc 4 illuminaRatv1 2 klahomology 3 m10kcod 4 mamurhesusmamuenseprobe 1 mamurhesusmamuugcdf 1 mamurhesusmamuugprobe 1 mgug4104a 4 mm11ksubammensgprobe 2 mm11ksubammenstcdf 2 mm11ksubammentrezgcdf 2 mm11ksubammrefseqcdf 2 mm11ksubammugprobe 2 mm11ksubammvegae 1 mm11ksubammvegaeprobe 1 mm11ksubammvegagcdf 1 mm11ksubammvegagprobe 1 mm11ksubbmmenstcdf 2 mm11ksubbmmrefseqcdf 2 mm11ksubbmmug 2 mm11ksubbmmvegaecdf 1 mm11ksubbmmvegagcdf 1 mm11ksubbmmvegatcdf 1 mm430a2mmensecdf 1 mm430a2mmrefseq 2 mm430a2mmrefseqprobe 1 mm430a2mmugprobe 1 mm430a2mmvegaecdf 1 mm430a2mmvegagcdf 1 mm430a2mmvegatprobe 1 mm430ammenstprobe 2 mm430ammrefseq 2 mm430ammrefseqprobe 2 mm430ammvegae 1 mm430bmmensecdf 2 mm430bmmenstcdf 2 mm430bmmugcdf 2 mm430bmmvegaecdf 2 mm430mmvegagcdf 2 mm430mmvegat 2 mm430mmvegatcdf 2 mm74av1mmensgprobe 2 mm74av1mmenstprobe 2 mm74av1mmentrezg 2 mm74av1mmrefseqprobe 2 mm74av1mmug 3 mm74av1mmvegag 1 mm74av2mmensgcdf 3 mm74av2mmensgprobe 2 mm74av2mmenstcdf 2 mm74av2mmentrezgcdf 2 mm74av2mmug 3 mm74av2mmugprobe 2 mm74av2mmvegaecdf 2 mm74bv2mmense 2 mm74bv2mmenst 2 mm74bv2mmenstcdf 2 mm74bv2mmrefseq 2 mm74bv2mmvegaecdf 1 mm74bv2mmvegagcdf 2 mm74bv2mmvegatcdf 1 mm74cv2mmenseprobe 2 mm74cv2mmugcdf 2 mm74cv2mmugprobe 2 mpedbarray 2 mu19ksubb 3 OperonHumanV3 2 osriceosrefseqprobe 2 hs133av2hsensg7cdf 1 hs133av2hsrefseq7cdf 1 hs133av2hsrefseq7probe 1 hs133av2hsug7cdf 1 hs133bhsenst7cdf 1 hs133phsense7cdf 1 hs133phsense7probe 1 hs133phsrefseq7cdf 1 hs133phsug7cdf 1 hs133xhsenst7cdf 2 hs133xhsug7cdf 1 hs133xptense7probe 1 hs95av2hsensg7cdf 1 hs95av2hsenst7cdf 1 hs95av2hsentrezg7cdf 1 hs95av2hsentrezg7probe 1 hs95av2hsrefseq7probe 1 MmusculusGenome.mm7 1 hsex10stv2hsensg7probe 1 hsex10stv2hsenst7probe 1 hsex10stv2hsentrezg7cdf 1 hsex10stv2hsentrezg7probe 1 hsex10stv2ptensg7probe 1 hsfocushsensg7cdf 1 hsfocushsentrezg7cdf 1 hsfocushsug7cdf 1 hsfocusptense7cdf 1 atgenomeatrefseq7probe 1 cfcanine2cfentrezg7probe 1 cfcanine2cfrefseq7cdf 1 cfcanine2cfug7cdf 1 ggchickenggense7cdf 1 ggchickenggensg7probe 1 hs133ahsentrezg7cdf 1 hs133aptense7cdf 1 hs133av2hsense7cdf 1 vvgrapevvtigr7probe 1 vvgrapevvtigrprobe 1 HsapiensGenome.hg17 1 mm11ksubammensg7probe 1 mm11ksubammenst7probe 1 mm11ksubammrefseq7probe 1 mm11ksubammug7cdf 1 mm11ksubbmmentrezg7cdf 1 mm11ksubbmmrefseq7cdf 1 mm430ammense7cdf 2 mm430ammentrezg7cdf 2 mm430ammrefseq7probe 1 mm430ammug7cdf 1 mm430ammug7probe 1 mm430bmmenst7probe 1 mm430bmmrefseq7cdf 1 mm430bmmug7cdf 2 mm430mmense7cdf 1 mm430mmentrezg7probe 1 mm74av1mmensg7cdf 1 mm74av1mmug7probe 1 mm74av2mmense7probe 2 mm74av2mmensg7cdf 1 mm74av2mmensg7probe 1 mm74av1mmense7cdf 1 mm74av2mmrefseq7cdf 1 mmex10stv1mmenst7cdf 1 mmex10stv1mmentrezg7cdf 1 BSgenome.Mmusculus.UCSC.mm6 1 hsex10stv2ptense 1 hsex10stv2ptensecdf 1 hsex10stv2ptensg 1 hsex10stv2ptensgcdf 1 hsex10stv2ptenstcdf 2 hsex10stv2ptenstprobe 2 osriceostigr 1 TxDb.Athaliana.BioMart.plantsmart28 59 BSgenome.Vvinifera.URGI.IGGP12Xv0 26 BSgenome.Vvinifera.URGI.IGGP12Xv2 30 rn34arnense7probe 1 rn230rnensg7cdf 1 rn230arnrefseq7probe 1 rn230rnentrezg7probe 2 rn230brnense7probe 1 org.Hs.cross.db 7 rnex10stv1rnentrezg7cdf 1 rnex10stv1rnenst7cdf 1 rnex10stv1rnense7cdf 1 rn230rnensg7probe 2 rn230brnensg7probe 2 rn34arnenst7cdf 1 rn230brnenst7probe 1 rn230arnensg7cdf 1 rn230arnense7cdf 1 hsex10stv2hsense 2 hsex10stv2hsenstprobe 1 rnex10stv1rnensgcdf 1 rnex10stv1rnenst 1 illuminaHumanv2ProbeID.db 2 illuminaRatv1ProbeID.db 2 osriceosrefseq7probe 1 osriceostigr7probe 1 homolog.db 2 int.geneint.db 3 org.Hs.bf.db 4 org.HsMm.ortholog.db 2 org.Mm.cross.db 2 org.Rn.ipi.db 2 org.Rn.ref.db 4 MeSH.Eco.536.eg.db 0 MeSH.Atu.K84.eg.db 1 MeSH.Hsa.eg.db 19 BSgenome.Hsapiens.UCSC.hg38.masked 158 MeSH.Der.eg.db 17 MeSH.Mtr.eg.db 16 MeSH.Spu.eg.db 17 MeSH.Sco.A32.eg.db 17 MeSH.Osa.eg.db 17 MeSH.Zma.eg.db 17 MeSH.Cal.SC5314.eg.db 17 MeSH.Sau.MSSA476.eg.db 0 MeSH.Ddi.AX4.eg.db 16 MeSH.Cel.eg.db 18 MeSH.Sau.ED98.eg.db 0 MeSH.Eco.K12.MG1655.eg.db 16 MeSH.Sau.Newman.eg.db 0 MeSH.Pab.eg.db 17 MeSH.Ssc.eg.db 17 MeSH.Sau.M013.eg.db 0 MeSH.Cja.eg.db 17 MeSH.Eco.O157.H7.Sakai.eg.db 18 MeSH.Sau.MSHR1132.eg.db 0 MeSH.Dpe.eg.db 19 MeSH.Sau.VC40.eg.db 0 MeSH.Dgr.eg.db 19 EnsDb.Mmusculus.v75 48 XtraSNPlocs.Hsapiens.dbSNP144.GRCh37 58 hs133av2hsugcdf 2 zmahomology 3 BSgenome.Hsapiens.1000genomes.hs37d5 810 hs133ahsenst 2 rnu34 4 btbovinebtensgprobe 1 hsfocushsvegag 2 mm74av2mmenseprobe 3 hs133bptensecdf 2 rn230arnenstcdf 2 btbovinebtenseprobe 2 btbovinebtensgcdf 1 btbovinebtug 1 btbovinebtugcdf 2 btbovinebtugprobe 2 celhomology 3 cfcanine2cfensgprobe 2 cfcanine2cfvegat 2 cfcanine2cfvegatcdf 1 cfcanine2cfug 2 dmdrosophila2dmensecdf 2 dmdrosophila2dmenseprobe 2 dmdrosophila2dmensg 2 dmdrosophila2dmensgprobe 2 dmdrosophila2dmug 2 dmdrosophila2dmugcdf 2 dmehomology 2 dmgenome1dmensgcdf 2 dmgenome1dmenstprobe 2 dmgenome1dmrefseq 2 dmgenome1dmrefseqcdf 2 dmgenome1dmugprobe 2 drosgenome1 3 drzebrafishdrense 2 drzebrafishdrensecdf 2 drzebrafishdrenseprobe 1 ggahomology 3 ggchickenggensg 2 ggchickenggentrezgcdf 1 ggchickenggrefseq 1 drzebrafishdrrefseq 2 drzebrafishdrug 2 drzebrafishdrvegat 1 hgug4111a 3 hs133ahsense 3 hs133ahsensecdf 2 hs133ahsug 3 hs133ahsugcdf 2 hs133ahsvegatcdf 1 hs133aptensg 2 hs133aptenstcdf 2 hs133av2hsenstcdf 2 hs133av2hsrefseqcdf 2 hs133av2hsrefseqprobe 2 hs133av2hsvegae 2 hs133av2hsvegag 1 hs133av2hsvegatcdf 2 hs133av2ptensgprobe 2 hs133av2ptenstprobe 2 hs133av2ptentrezgprobe 2 hs133bhsensecdf 2 hs133bhsensgprobe 2 hs133bhsenstcdf 3 hs133bhsentrezgcdf 2 hs133bhsentrezgprobe 2 hs133bhsvegae 2 hs133bhsvegaecdf 2 hs133bhsvegagprobe 2 hs133bhsvegat 1 hs133bptensgcdf 2 hs133bptensgprobe 2 hs133bptentrezgprobe 2 hs133phsensg 3 hs133phsensgcdf 2 hs133phsvegaecdf 1 hs133phsvegaeprobe 2 hs133phsvegag 1 hs133phsvegat 2 PartheenMetaData 2 rgu34a 3 rgug4105a 3 rgug4130a 3 rn230arnensgprobe 2 rn230arnenst 2 rn230arnenstprobe 2 rn230arnentrezg 3 rn230arnentrezgprobe 2 rn230brnenseprobe 2 rn230brnensgcdf 2 rn230brnensgprobe 3 rn230brnrefseqprobe 2 rn230brnugcdf 3 rn230brnugprobe 2 rn230rnenstprobe 3 rn230rnentrezgcdf 3 rn230rnrefseq 3 rn230rnrefseqprobe 2 rn230rnug 3 rn34arnensg 2 rn34arnensgprobe 2 rn34arnenst 2 rn34arnenstcdf 2 rn34arnentrezgcdf 2 rn34arnug 2 taehomology 2 vvihomology 3 xenopuslaevis 3 atgenomeatrefseq 2 atgenomeatrefseqprobe 2 ygs98 4 zebrafish 4 ath1attaircdf 2 ath1attairprobe 2 BSgenome.Hsapiens.UCSC.hg16 2 mmex10stv1mmenstprobe 1 mmex10stv1mmentrezg 1 mmex10stv1mmentrezgcdf 1 mmex10stv1mmug 1 mmex10stv1mmugprobe 1 dmdrosophila2dmrefseq7cdf 1 dmgenome1dmensg7probe 1 dmgenome1dmenst7cdf 1 hs133pptenst 3 hs133pptenstcdf 2 hs133xhsensecdf 2 hs133xhsensgcdf 3 hs133xhsug 3 hs133xhsvegagprobe 2 hs133xhsvegatcdf 2 hs133xptenstprobe 3 hs133xptentrezgcdf 3 hs133xptrefseqcdf 2 hs25kresogen 2 hs95av2hsenseprobe 2 hs95av2hsentrezgprobe 2 hs95av2hsrefseq 2 hs95av2ptentrezgprobe 2 hsfocushsenseprobe 2 hsfocushsensgprobe 2 hsfocushsenstcdf 2 hsfocushsenstprobe 2 hsfocushsrefseq 2 hsfocushsrefseqcdf 3 hsfocushsvegae 2 hsfocushsvegaecdf 1 hsfocushsvegagcdf 2 hsfocusptensg 2 hsfocusptensgprobe 2 hsfocusptenstprobe 3 hsfocusptentrezgcdf 2 hu35ksuba 4 JazaeriMetaData 2 mamurhesusmamuense 1 mamurhesusmamuensg 2 mamurhesusmamuentrezgcdf 1 mamurhesusmamuug 1 mgu74bv2 3 mgu74c 4 mguatlas5k 3 mgug4120a 3 mgug4121a 4 mm11ksubammensecdf 2 mm11ksubammenseprobe 2 mm11ksubammensgcdf 1 mm11ksubammugcdf 2 mm11ksubammvegaecdf 1 mm11ksubammvegatprobe 2 mm11ksubbmmensecdf 2 mm11ksubbmmensgcdf 2 mm11ksubbmmensgprobe 1 mm11ksubbmmenst 2 mm11ksubbmmentrezgcdf 2 mm11ksubbmmrefseqprobe 2 mm11ksubbmmugcdf 2 mm11ksubbmmvegae 1 mm11ksubbmmvegag 1 mm11ksubbmmvegagprobe 2 mm11ksubbmmvegat 1 mm24kresogen 3 mm430a2mmenseprobe 1 mm430a2mmensgcdf 1 mm430a2mmentrezg 2 mm430a2mmentrezgcdf 2 mm430a2mmvegatcdf 1 mm430ammensecdf 3 mm430ammenseprobe 2 mm430ammenstcdf 2 mm430ammrefseqcdf 3 mm430ammugprobe 2 mm430ammvegagcdf 2 mm430ammvegagprobe 2 mm430ammvegatcdf 2 mm430bmmense 3 mm430bmmenstprobe 2 mm430bmmentrezgcdf 2 mm430bmmrefseqprobe 3 mm430bmmugprobe 2 mm430bmmvegag 2 mm430bmmvegagcdf 2 mm430bmmvegat 1 mm430bmmvegatprobe 1 mm430mmenstcdf 2 mm430mmentrezgprobe 2 mm430mmvegatprobe 1 mm74av1mmensecdf 3 mm74av1mmensg 2 mm74av1mmensgcdf 2 mm74av1mmenstcdf 2 mm74av1mmrefseqcdf 2 mm74av1mmvegae 1 mm74av1mmvegaecdf 2 mm74av1mmvegaeprobe 2 mm74av1mmvegatcdf 1 mm74av2mmenst 3 mm74av2mmenstprobe 3 mm74av2mmentrezgprobe 3 mm74av2mmrefseq 3 mm74av2mmvegagcdf 1 mm74av2mmvegaeprobe 1 mm74av2mmvegag 2 mm74av2mmvegat 2 mm74av2mmvegatprobe 2 mm74bv2mmenstprobe 2 mm74bv2mmentrezg 3 mm74bv2mmrefseqcdf 2 mm74bv2mmugcdf 2 mm74bv2mmvegaeprobe 1 mm74bv2mmvegat 2 mm74cv2mmensg 2 mm74cv2mmensgcdf 2 mm74cv2mmvegae 1 mm74cv2mmensgprobe 2 mm74cv2mmentrezgcdf 2 mm74cv2mmrefseq 2 mm74cv2mmrefseqprobe 2 mm74cv2mmvegagcdf 1 mm74cv2mmvegatprobe 2 ncrhomology 3 osriceosrefseq 2 hs133av2hsenst7probe 1 hs133av2hsentrezg7cdf 1 hs133ahsug7cdf 1 hs133av2hsug7probe 1 hs133bhsentrezg7cdf 1 hs133bhsrefseq7probe 1 hs133bhsug7probe 1 hs133phsensg7cdf 1 hs133phsensg7probe 1 hs133xptense7cdf 2 hs95av2hsense7probe 1 hs95av2hsenst7probe 1 hs95av2hsrefseq7cdf 1 hs95av2hsug7cdf 1 hsex10stv2hsense7probe 1 hsex10stv2hsensg7cdf 1 hsex10stv2hsrefseq7probe 1 hsex10stv2hsug7probe 2 hsfocushsenst7cdf 1 hsfocushsenst7probe 1 hsfocusptensg7cdf 1 ath1attigr7cdf 1 ggchickenggenst7cdf 1 ggchickenggrefseq7cdf 1 ggchickenggrefseq7probe 1 ggchickenggug7probe 1 hs133ahsense7cdf 1 hs133ahsensg7probe 1 hs133ahsenst7probe 1 hs133ahsentrezg7probe 1 hs133ahsrefseq7cdf 1 hs133aptensg7probe 1 vvgrapevvtigr 1 mm11ksubammense7cdf 2 mm11ksubammenst7cdf 1 mm11ksubammentrezg7cdf 1 mm11ksubammrefseq7cdf 1 mm11ksubbmmense7cdf 1 mm11ksubbmmense7probe 1 mm11ksubbmmensg7probe 1 mm11ksubbmmug7cdf 1 mm11ksubbmmug7probe 1 mm430ammense7probe 2 mm430ammenst7probe 2 mm430bmmense7cdf 1 mm430bmmense7probe 1 mm430bmmensg7cdf 2 mm430bmmenst7cdf 1 mm430bmmrefseq7probe 1 mm430mmenst7cdf 2 mm430mmrefseq7cdf 1 mm430mmrefseq7probe 1 mm430mmug7cdf 1 mm74av1mmenst7cdf 1 mm74av1mmentrezg7probe 1 mm74av2mmenst7probe 1 mm430mmug7probe 1 mm74av1mmense7probe 2 mm74av2mmug7cdf 1 mmex10stv1mmense7probe 1 mmex10stv1mmensg7cdf 1 mmex10stv1mmensg7probe 1 mmex10stv1mmentrezg7probe 1 mmex10stv1mmug7probe 1 mmex10stv1mmense 1 mmex10stv1mmensg 1 hsex10stv2ptenst 1 hsex10stv2ptentrezg 1 hsex10stv2ptentrezgcdf 1 rn230brnense7cdf 1 rn230rnenst7probe 1 rn34arnug7cdf 1 rn230arnug7cdf 1 rn34arnrefseq7cdf 1 rn230rnug7cdf 1 rn34arnug7probe 1 osriceosrefseq7cdf 1 org.Hs.goa.db 6 rnex10stv1rnentrezg7probe 1 rnex10stv1rnensg7probe 1 rnex10stv1rnenst7probe 1 rn34arnrefseq7probe 1 rn230rnrefseq7cdf 1 rn34arnense7cdf 1 rn230rnug7probe 1 rnex10stv1rnrefseq7probe 1 rn230brnentrezg7probe 1 rn230arnentrezg7cdf 1 rn230brnentrezg7cdf 1 rn230arnenst7probe 2 rn230arnense7probe 1 osriceostigr7cdf 1 hsex10stv2hsenseprobe 1 hsex10stv2hsentrezgprobe 1 hsex10stv2hsrefseqcdf 1 hsex10stv2hsug 1 rnex10stv1rnensecdf 1 rnex10stv1rnentrezg 1 rnex10stv1rnrefseq 2 rnex10stv1rnrefseqprobe 2 rnex10stv1rnugcdf 1 illuminaMousev1p1ProbeID.db 2 illuminaMousev2ProbeID.db 1 mamurhesusmamurefseqprobe 1 mamurhesusmamurefseq 1 sc.bacello.db 1 sysptm.db 2 int.did.db 2 int.intact.db 5 org.Hs.pep.db 1 org.Mm.sp.db 4 MeSH.Eco.B.REL606.eg.db 0 MeSH.Sau.Mu50.eg.db 0 MeSH.Eco.UTI89.eg.db 0 MeSH.Eco.O111.H.11128.eg.db 0 TxDb.Dmelanogaster.UCSC.dm6.ensGene 239 LymphoSeqDB 139 MafDb.ExAC.r0.3.1.snvs.hs37d5 3 TxDb.Celegans.UCSC.ce11.refGene 49 hta20transcriptcluster.db 56 TxDb.Mmulatta.UCSC.rheMac8.refGene 25 clariomshumanhttranscriptcluster.db 27 BSgenome.Ggallus.UCSC.galGal5 26 fitCons.UCSC.hg19 26 alternativeSplicingEvents.hg19 25 pd.clariom.s.rat.ht 24 IlluminaHumanMethylationEPICanno.ilm10b2.hg19 293 TxDb.Ggallus.UCSC.galGal4.refGene 25 BSgenome.Vvinifera.URGI.IGGP8X 25 TxDb.Sscrofa.UCSC.susScr3.refGene 25 clariomshumantranscriptcluster.db 36 hta20probeset.db 30 clariomdhumantranscriptcluster.db 47 rta10transcriptcluster.db 24 MafDb.ESP6500SI.V2.SSA137.hs37d5 7 pd.clariom.s.mouse 46 pd.clariom.d.human 68 pd.clariom.s.human 80 pd.clariom.s.human.ht 32 BSgenome.Celegans.UCSC.ce11 121 TxDb.Ptroglodytes.UCSC.panTro4.refGene 24 FlowSorted.CordBloodNorway.450k 1 MafDb.1Kgenomes.phase3.hs37d5 72 TxDb.Rnorvegicus.UCSC.rn6.refGene 135 TxDb.Cfamiliaris.UCSC.canFam3.refGene 26 BSgenome.Mmulatta.UCSC.rheMac8 78 clariomdhumanprobeset.db 57 MafDb.ESP6500SI.V2.SSA137.GRCh38 7 BSgenome.Ptroglodytes.UCSC.panTro5 28 clariomsrathttranscriptcluster.db 23 mta10transcriptcluster.db 25 IlluminaHumanMethylation27kanno.ilmn12.hg19 45 EnsDb.Hsapiens.v86 2879 pd.clariom.s.mouse.ht 24 miRBaseVersions.db 162 IlluminaHumanMethylationEPICmanifest 1138 TxDb.Btaurus.UCSC.bosTau8.refGene 28 TxDb.Drerio.UCSC.danRer10.refGene 73 MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5 2 MafDb.1Kgenomes.phase1.hs37d5 151 TxDb.Mmulatta.UCSC.rheMac3.refGene 24 lumiMouseIDMapping.db 1 clariomsmousehttranscriptcluster.db 25 clariomsmousetranscriptcluster.db 31 clariomsrattranscriptcluster.db 25 mta10probeset.db 31 rta10probeset.db 23 pd.clariom.s.rat 24 MafDb.gnomAD.r2.0.1.hs37d5 6 MafDb.gnomADex.r2.0.1.hs37d5 5 IlluminaHumanMethylationEPICanno.ilm10b4.hg19 1199 SNPlocs.Hsapiens.dbSNP149.GRCh38 52 MafDb.ExAC.r1.0.hs37d5 50 MafDb.ExAC.r1.0.nonTCGA.hs37d5 26 IlluminaHumanMethylationEPICanno.ilm10b3.hg19 39 TxDb.Ggallus.UCSC.galGal5.refGene 45 AHCytoBands 20 MafDb.TOPMed.freeze5.hg38 29 AHEnsDbs 36 alternativeSplicingEvents.hg38 26 GenomeInfoDbData 55472 SNPlocs.Hsapiens.dbSNP150.GRCh38 58 MafDb.gnomAD.r2.0.1.GRCh38 5 MafDb.1Kgenomes.phase3.GRCh38 54 MafDb.ExAC.r1.0.nonTCGA.GRCh38 29 SNPlocs.Hsapiens.dbSNP151.GRCh38 12 BSgenome.Sscrofa.UCSC.susScr11 48 LRBase.Hsa.eg.db 5 BSgenome.Aofficinalis.NCBI.V1 24 LRBase.Dme.eg.db 5 LRBase.Gga.eg.db 4 LRBase.Pab.eg.db 4 LRBase.Ssc.eg.db 4 MafDb.gnomADex.r2.1.hs37d5 54 org.hs.eg.db 2 JASPAR2018 325 geneplast.data.string.v91 38 LRBase.Ath.eg.db 4 LRBase.Bta.eg.db 4 BSgenome.Carietinum.NCBI.v1 25 LRBase.Cel.eg.db 4 LRBase.Dre.eg.db 5 LRBase.Mmu.eg.db 4 LRBase.Rno.eg.db 4 TxDb.Ptroglodytes.UCSC.panTro5.refGene 20 TxDb.Sscrofa.UCSC.susScr11.refGene 29 MafDb.1Kgenomes.phase1.GRCh38 27 MafDb.gnomADex.r2.0.1.GRCh38 4 MafDb.TOPMed.freeze5.hg19 27 BSgenome.Ptroglodytes.UCSC.panTro6 26 MafDb.gnomAD.r2.1.hs37d5 32 LRBase.Xtr.eg.db 4 ribosomaldatabaseproject11.5MgDb 4 silva128.1MgDb 5 MafDb.ExAC.r1.0.GRCh38 44 EuPathDB 23 TxDb.Celegans.UCSC.ce11.ensGene 103 MafDb.gnomADex.r2.1.GRCh38 23 BSgenome.Cjacchus.UCSC.calJac3 23 BSgenome.Mdomestica.UCSC.monDom5 23 TxDb.Btaurus.UCSC.bosTau9.refGene 28 TxDb.Ggallus.UCSC.galGal6.refGene 27 BSgenome.Drerio.UCSC.danRer11 69 BSgenome.Ggallus.UCSC.galGal6 41 hpAnnot 23 MafDb.gnomAD.r2.1.GRCh38 56 org.Mxanthus.db 32 MafDb.gnomAD.r3.0.GRCh38 6 ENCODExplorerData 28 TxDb.Drerio.UCSC.danRer11.refGene 36 GenomicState 71 TxDb.Ptroglodytes.UCSC.panTro6.refGene 21 TxDb.Mmulatta.UCSC.rheMac10.refGene 109 BSgenome.Mmulatta.UCSC.rheMac10 134 rat2302frmavecs 23 BSgenome.Btaurus.UCSC.bosTau9 36 go.db 1 EpiTxDb.Hs.hg38 56 MafH5.gnomAD.r3.0.GRCh38 3 EpiTxDb.Mm.mm10 20 base 1 seqCAT 0 muscat 1 facets 0 affy 1 AnnotationDbi 17 Biobase 9 BiocParallel 15 BSgenome 3 genefilter 2 GenomeGraphs 0 GenomicFeatures 12 grDevices 1 Gviz 2 IRanges 13 interactiveDisplayBase 1 JASPAR2020 1775 BSgenome.Amellifera.NCBI.AmelHAv3.1 22 CancerSubtypes 0 CellMixS 0 CEMiTool 0 ChAMP 1 parallel 1 preprocessCore 1 Rgraphviz 1 Ringo 1 tcltk 1 rlang 459 rstudio 0 S4Vectors 9 sitePath 0 GenomeInfoDb 19 ggtree 13 string 0 KEGGREST 4 methods 1 multtest 1 affyio 1 biomaRt 2 compiler 1 cummeRbund 0 geneplotter 1 GenomicAlignments 4 GenomicRanges 5 KEGGgraph 1 metaboliteIDmapping 152 geneplast.data 40 TxDb.Mmusculus.UCSC.mm39.refGene 115 BSgenome.Creinhardtii.JGI.v5.6 27 CATALYST 1 universalmotif 1 geneLenDataBase 10 NOISeq 1 splines 1 stats4 1 SummarizedExperiment 4 tools 1 utils 1 VariantAnnotation 1 vsn 1 BANDITS 0 AnnotationHub 3 BiocGenerics 10 BiocInstaller 1 Biostrings 15 DNAcopy 1 edgeR 11 ensembldb 4 gage 0 graph 1 graphics 1 MeSH.Eca.eg.db 3 CluMSID 0 waddR 0 pathview 1 rtracklayer 3 XVector 3 EpiTxDb.Sc.sacCer3 20 phastCons30way.UCSC.hg38 19 BSgenome.Dvirilis.Ensembl.dvircaf1 20 vcfR 1 limma 24 annotate 2 biovizBase 1 datasets 1 DESeq 0 DESeq2 6 gdsfmt 1 grid 1 BSgenome.Ppaniscus.UCSC.panPan1 22 TxDb.Rnorvegicus.UCSC.rn6.ncbiRefSeq 19 BSgenome.Ppaniscus.UCSC.panPan2 28 coMET 0 BiocWorkflowTools 0 BiocSklearn 0 ATACseqQC 1 cliqueMS 1 synergyfinder 0 tradeSeq 1 DEXICA 0 Rsamtools 3 SeqArray 0 SeqVarTools 1 stats 1 zlibbioc 5 MafH5.gnomAD.v3.1.1.GRCh38 5 AHLRBaseDbs 25 hthgu133plusa.db 19 htratfocus.db 19 TxDb.Athaliana.BioMart.plantsmart51 34 rGenomeTracksData 36 TxDb.Cfamiliaris.UCSC.canFam5.refGene 17 p 0 TxDb.Hsapiens.UCSC.hg38.refGene 88 htmg430b.db 18 BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major 28 CTCF 29 BSgenome.Hsapiens.UCSC.hg38.dbSNP151.minor 30 karyoploteR 1 synaptome.db 31 KaryoploteR 0 GeneSummary 31 ontoProcData 19 synaptome.data 28 u 0 AHPathbankDbs 22 gwascatData 18 AHPubMedDbs 25 hthgu133pluspm.db 27 hthgu133plusb.db 18 BSgenome.Rnorvegicus.UCSC.rn7 118 scAnnotatR.models 18 TxDb.Rnorvegicus.UCSC.rn7.refGene 110 kegg.db 1 AHMeSHDbs 27 ichorCNA 1 AHWikipathwaysDbs 20 htmg430pm.db 22 htmg430a.db 19 htrat230pm.db 19 Orthology.eg.db 140 chromhmmData 51 BSgenome.Mmusculus.UCSC.mm39 153 excluderanges 54 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