CHANGES IN VERSION 0.99.10 -------------------------- o Fixed the call to plot_upset to avoid duplicate definition of arguments CHANGES IN VERSION 0.99.9 ------------------------- o Added CITATION file, extended some examples CHANGES IN VERSION 0.99.8 ------------------------- o Include UpSet plots (Lex et al, IEEE Transactions on Visualization and Computer Graphics 2014) CHANGES IN VERSION 0.99.7 ------------------------- o Allow linewidth to be set, add Venn diagrams based on rank cutoffs CHANGES IN VERSION 0.99.5 ------------------------- o Updated documentation CHANGES IN VERSION 0.99.4 ------------------------- o Expanded tests, added experimental function to reorder factor levels before plotting CHANGES IN VERSION 0.99.3 ------------------------- o Bug fixes CHANGES IN VERSION 0.99.2 ------------------------- o Fixed replacement methods for COBRAPlot class CHANGES IN VERSION 0.99.1 ------------------------- o Removed benchmarkR dependence CHANGES IN VERSION 0.3.13 ------------------------- o Adapted package for Bioconductor submission CHANGES IN VERSION 0.3.11 ------------------------- o Renamed to iCOBRA CHANGES IN VERSION 0.3.9 ------------------------ o Improved constructors CHANGES IN VERSION 0.3.8 ------------------------ o Added check for duplicated feature IDs CHANGES IN VERSION 0.3.7 ------------------------ o Fixed bug causing problems for Venn diagrams if only one method is available o Included information texts in app CHANGES IN VERSION 0.3.5 ------------------------ o Simplified constructors CHANGES IN VERSION 0.3.4 ------------------------ o Modified calculation of overlaps CHANGES IN VERSION 0.3.2 ------------------------ o Added unit tests CHANGES IN VERSION 0.3.1 ------------------------ o Updated information messages in app CHANGES IN VERSION 0.3.0 ------------------------ o Bug fixes in app o Addition of small example data set o Addition of information banners to app CHANGES IN VERSION 0.2.0 ------------------------ o Added deviation plot o Bug fixes