Bioconductor Single Package Builder - Build History
nebbiolo1 Summary
| Package: singIST |
| Version: 0.99.84 |
| RVersion: 4.6 |
| BiocVersion: 3.23 |
| BuildCommand: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data singIST |
| BuildTime: 11 minutes 23.37 seconds |
| CheckCommand: |
| CheckTime: |
| BuildBinCommand: |
| BuildBinTime: |
| PackageFileSize: -1.00 KiB |
| BuildID:: singIST_20260106200211 |
| PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: singIST. Starting Build package. |
| PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 0. Build Package status: 1. |
nebbiolo1 BUILD SRC output
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R CMD BUILD
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* checking for file singIST/DESCRIPTION ... OK
* preparing singIST:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
* creating vignettes ... ERROR
--- re-building singISTvignette.Rmd using rmarkdown
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Quitting from singISTvignette.Rmd:564-566 [unnamed-chunk-20]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `FUN()`:
! subscript out of bounds
---
Backtrace:
1. base::withVisible(knit_print(x, ...))
2. knitr::knit_print(x, ...)
3. knitr:::knit_print.default(x, ...)
4. knitr::normal_print(x)
5. base::print(x)
6. utils:::print.sessionInfo(x)
7. base::print(mkLabel(x, "loadedOnly"), quote = FALSE, ...)
8. utils (local) mkLabel(x, "loadedOnly")
9. base::paste(...)
10. base::vapply(L[[n]], `[[`, "", "Package")
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'singISTvignette.Rmd' failed with diagnostics:
subscript out of bounds
--- failed re-building singISTvignette.Rmd
SUMMARY: processing the following file failed:
singISTvignette.Rmd
Error: Vignette re-building failed.
Execution halted