Bioconductor Single Package Builder - Build History

Snapshot Date:

URL: https://git.bioconductor.org/packages/chevreulPlot

Last Changed Rev: / Revision:

Last Changed Date:

Hostname	OS /Arch	BUILD	CHECK	BUILD BIN	POST-PROCESSING
nebbiolo1	Linux (Ubuntu 24.04.1 LTS)/x86_64	ERROR	skipped	skipped	skipped

nebbiolo1 Summary

[top]

Package: chevreulPlot

Version: 0.99.22

RVersion: 4.5

BiocVersion: 3.21

BuildCommand: /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data chevreulPlot

BuildTime: 1 minutes 29.78 seconds

CheckCommand:

CheckTime:

BuildBinCommand:

BuildBinTime:

PackageFileSize: -1.00 KiB

BuildID:: chevreulPlot_20241119052026

PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: chevreulPlot. Starting Build package.

PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 0. Build Package status: 1.

nebbiolo1 BUILD SRC output

[top]

===============================

 R CMD BUILD

===============================

* checking for file chevreulPlot/DESCRIPTION ... OK
* preparing chevreulPlot:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building chevreulPlot.Rmd using rmarkdown
--- finished re-building chevreulPlot.Rmd

--- re-building visualization.Rmd using rmarkdown

Quitting from lines 90-94 [unnamed-chunk-2] (visualization.Rmd)
Error: processing vignette 'visualization.Rmd' failed with diagnostics:
Can't select columns that don't exist.
 Column `nCount_RNA` doesn't exist.
--- failed re-building visualization.Rmd

SUMMARY: processing the following file failed:
  visualization.Rmd

Error: Vignette re-building failed.
Execution halted

nebbiolo1 CHECK output

[top]

nebbiolo1 BUILD BIN output

[top]