Package: scrapbook
Title: Single-cell RNA-seq analyses with scrapper
Version: 1.0.0
Date: 2026-02-11
Authors@R: person('Aaron', 'Lun', role = c('aut', 'cre'), email="infinite.monkeys.with.keyboards@gmail.com", comment=c(ORCID="0000-0002-3564-4813"))
Description: 
    Demonstrates some basic analysis of single-cell RNA-seq data with scrapper. 
    This includes quality control, normalization, feature selection, various forms of dimensionality reduction, clustering into subpopulations, and detection of marker genes.
    It is intended for users who already have some familiarity with R and want to get hands-on with some basic single-cell analyses.
Depends: AnnotationHub, BiocStyle, bluster, cluster, DropletTestFiles,
        DropletUtils, dynamicTreeCut, edgeR, ggplot2, gridExtra,
        msigdbr, pheatmap, scater, scrapper, scRNAseq, TENxPBMCData
Suggests: rmarkdown, bookdown, knitr
VignetteBuilder: knitr
License: MIT + file LICENSE
URL: https://github.com/libscran/scrapbook
BugReports: https://github.com/libscran/scrapbook/issues
biocViews: Workflow, SingleCellWorkflow
BiocType: book
RoxygenNote: 7.3.3
git_url: https://git.bioconductor.org/packages/scrapbook
git_branch: RELEASE_3_23
git_last_commit: 362f100
git_last_commit_date: 2026-04-28
Repository: Bioconductor 3.23
Date/Publication: 2026-04-29
NeedsCompilation: no
Packaged: 2026-04-29 14:53:29 UTC; biocbuild
Author: Aaron Lun [aut, cre] (ORCID: <https://orcid.org/0000-0002-3564-4813>)
Maintainer: Aaron Lun <infinite.monkeys.with.keyboards@gmail.com>
