VERSION 0.99.6 -------------- Updates for Bioconductor submission: * Add tests for SingleCellExperiment support * Fix issues with using file.path VERSION 0.99.5 -------------- Updates for Bioconductor submission: * Add support for SingleCellExperiment as input * Re-wrote plots in ggplot format * Fix issues with using file.path VERSION 0.99.5 -------------- Updates for Bioconductor submission: * Add output of infercnv object to documentation * Add ORCID to DESCRIPTION, clean README * Fix text typos, other minor fixes VERSION 0.99.3/4 ---------------- Updates for Bioconductor submission: * Fix atacInferCnv log output control VERSION 0.99.2 -------------- Updates for Bioconductor submission: * Add support for plot to save to file * Allow to contro output as verbose * Clean dependencies * Updates in documentation: details, example plots * Updates to testthat: extension of tests * Updates to DESCRIPTION VERSION 0.99.1 -------------- * Fix warning issue takes too long for building the package by including smaller test dataset * Use Signac/Seurat analysis as option (TRUE by default) VERSION 0.99.0 -------------- * Prepare for Bioconductor submission