Changes in version 1.4.0
o cSimulator handles non integers values for the ihibitors and
stimuli
o gaDiscreteT1.R: fix issue when only 1 model was returned within
tolerance
o reduceFuzzy.R fix bug that causes seg faut (model was not cut
properly)
o defaultParametersFuzzy.R: added nTF to set number of TF to
arbitrary value (not tested)
o CNORwrapFuzzy.R: fixed pMutation argument that was not
populated
o gaDiscrete functions return best score as well in the
dataframe.
o output names of the fields returned by gaDiscrete are now using
camel lower case so that plotFit from CellNoptR can be used
o add C simulator
Changes in version 0.99.8
o add NEWS.Rd in inst/
o move tests in inst/unitTests/
Changes in version 0.99.7
o USE CNOlist class from CellNOptR
Changes in version 0.99.6
o REFACTORING
• emove indexList and simList where possible.
• use preprocessing function inside CNORwrapFuzzy
• CNOList argument renamed in CNOlist
o CODE
• add hashtable in gaDiscrete useful for small model.
Changes in version 0.99.5
o UNIFORMISATION of NAMES/ARGUMENTS
• made after the same uniformisation was done in CellNOptR
1.3.19
• Update manual/vignettes accordingly
Changes in version 0.99.4
o add computeScoreFuzzy function.
Changes in version 0.99.3
o complete vignette.
Changes in version 0.99.1
o complete manual
Changes in version 0.99.0
o SIGNIFICANT USER-VISIBLE CHANGES
• CNORwrapFuzzy is the main user interface function.
• Tutorial completed
o NEW FEATURES
• parameters of the optimisation procedure in getRefinedModel
can be set by the user
• defaultParametersFuzzy ease the creation of a structure to
handle all the parameters
• removed readMIDAS and makeCNOlist, which are now called
directly from CellNOptR. Similarly, prep4simFuzzy calls
CellNOptR prep4sim instead of rewritting it.