Package: scDotPlot
Title: Cluster a Single-cell RNA-seq Dot Plot
Version: 1.6.0
Authors@R: c(
    person(given = c("Benjamin", "I"),
           family = "Laufer",
           role = c("aut", "cre"),
           email = "blaufer@gmail.com"),
    person(given = c("Brad", "A"),
           family = "Friedman",
           role = c("aut")))
Description: Dot plots of single-cell RNA-seq data allow for an
        examination of the relationships between cell groupings (e.g.
        clusters) and marker gene expression. The scDotPlot package
        offers a unified approach to perform a hierarchical clustering
        analysis and add annotations to the columns and/or rows of a
        scRNA-seq dot plot. It works with SingleCellExperiment and
        Seurat objects as well as data frames.
License: Artistic-2.0
URL: https://github.com/ben-laufer/scDotPlot
BugReports: https://github.com/ben-laufer/scDotPlot/issues
biocViews: Software, Visualization, DifferentialExpression,
        GeneExpression, Transcription, RNASeq, SingleCell, Sequencing,
        Clustering
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Depends: R (>= 4.4.0)
Imports: aplot, BiocGenerics, cli, dplyr, ggplot2, ggsci, ggtree,
        grDevices, magrittr, purrr, rlang, scales, scater, Seurat,
        SingleCellExperiment, stats, stringr, tibble, tidyr
Suggests: AnnotationDbi, BiocStyle, knitr, rmarkdown, scran, scRNAseq,
        scuttle, SeuratObject, testthat, vdiffr
VignetteBuilder: knitr
Config/testthat/edition: 3
Config/pak/sysreqs: libcairo2-dev cmake libfontconfig1-dev
        libfreetype6-dev libfribidi-dev libglpk-dev make
        libharfbuzz-dev libicu-dev libjpeg-dev libpng-dev libtiff-dev
        libuv1-dev libwebp-dev libxml2-dev libssl-dev python3
        zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2026-04-28 13:03:18 UTC
RemoteUrl: https://github.com/bioc/scDotPlot
RemoteRef: RELEASE_3_23
RemoteSha: 8f805b873b99956bc80874c546b9e8af79e27797
NeedsCompilation: no
Packaged: 2026-04-30 06:24:53 UTC; root
Author: Benjamin I Laufer [aut, cre],
  Brad A Friedman [aut]
Maintainer: Benjamin I Laufer <blaufer@gmail.com>
Built: R 4.6.0; ; 2026-04-30 06:44:30 UTC; windows
