97d1cb27e8478d7ae4de59a2de8c86e7 *CITATION
5b1cbed7781ea03b21ab92729ab4e2e2 *DESCRIPTION
82aad66b16517c9991aa8cae64982337 *INDEX
44cbf3cc0bc9a839ff8677a6c9be3cd1 *Meta/Rd.rds
9bac80ddfe4356a1ac6a75672ee8dbe9 *Meta/data.rds
50a9fa3e1aa2c47fa7bdbd6e6bb8974e *Meta/features.rds
e5177516f643ec4a8b7654e737d86b9a *Meta/hsearch.rds
613b3b42a8b36ba91f7c045db113e3d7 *Meta/links.rds
202ed00bdf14dd56387eadc671bb9f65 *Meta/nsInfo.rds
944f7de2654bd5ab8184447571bb9778 *Meta/package.rds
2dbeb8ad5746a230f2f0221d8f5da5a6 *Meta/vignette.rds
e096c80e50b90520bbd9b8ac19805a4c *NAMESPACE
22cb13d61ad7ff19b6188aec288f2a93 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/deepSNV
1e38ad1c35926fcbb1f4cb482a51bf18 *R/deepSNV.rdb
4a39ccbfbb9795cf57c30486ee5161a6 *R/deepSNV.rdx
7e36d18848c824f5db233e3832a56bb0 *README.md
eb93e43e868cf6b00523766e2093961c *TODO
3ccecc236923abcec5bf3979f95058ec *data/HIVmix.RData
e5e59d311d41716d436bda6c12d6b6f8 *data/RCC.RData
44fe941582b98ed2fb74a2ff43bd04dc *data/counts.RData
8f473e99da6aea7893fbf4f0967161a5 *data/phiX.RData
39946182d2a7087db51be00e27bfe68e *data/pi.RData
a198b59b439c25594d85e0f8c8afc300 *data/trueSNVs.RData
bdce9542f85039294f3238cd7138421b *doc/deepSNV.R
79ea907278cca8011a87b7954bfc02ce *doc/deepSNV.Rnw
3313ba9c8ddff835cd610fb65fcece8f *doc/deepSNV.pdf
841b3a4c76bfa702e3d085d15ff9c972 *doc/index.html
54d367cd8b44cdb9149572ec1942d977 *doc/shearwater.R
fc4e56aed626edbec5e35a7c0ac725b0 *doc/shearwater.Rnw
0e3c73c251c21d55d019afd8887fdc3e *doc/shearwater.pdf
b7cad0a8151f8a008a8d938a286b7228 *doc/shearwaterML.R
866271256074ead132c1e1225b663bac *doc/shearwaterML.Rmd
28170ef57be814a8817353d69af51ff7 *doc/shearwaterML.html
03adcf464008b8e2642cdb62807764d3 *example/deepSNV-example.R
f3dd841413d42161102b4b371b8b8e8f *example/shearwater-example.R
62e3352bca95588f9d1478ae36f1ed83 *extdata/control.bam
a3507164d703e922651e0e56236bc293 *extdata/control.bam.bai
9f9a82a95852ae5a1150280604b78693 *extdata/deepSNV.vcf
a04b4031bdc04278cb65173c35999698 *extdata/shearwater.vcf
726e8a03994c95b6598305bedf578845 *extdata/shearwater2.vcf
974e693f6dd19be388650d9ef95edb2c *extdata/shearwaterML.vcf
6af3a3077f6d4ab936e1bb777ad8e910 *extdata/test.bam
74ceb014e38fe7f5111bc9d501889a5e *extdata/test.bam.bai
2df1a587bda6e4c60cc283dfd468cbaa *help/AnIndex
2bc2c6b3f9a2acf82b27162629f0facb *help/aliases.rds
17e281bce66c9e4ac7211de2bcafce11 *help/deepSNV.rdb
6dbb4ba02a0949b9e9a577a2c915c2dc *help/deepSNV.rdx
dbd4d45422fcc17121ca62180ad03db2 *help/paths.rds
c9f4c9219ffcd58d0775c7a66355b533 *html/00Index.html
ee41876c0116916bb04bcf4fe3e43d78 *html/R.css
2b4473d361e1aba08e41169567b62d65 *libs/x64/deepSNV.dll
a6f27e43415443ec517df8f83a3570e3 *libs/x64/symbols.rds
