db92691e65d5f3276569dba739be4caf *DESCRIPTION
f12f1e386f7aa218e65786a22edd9156 *INDEX
33124fd64b3ca64fb8c656ca2acdbbaf *Meta/Rd.rds
3ac12893365ed22d20c843e637deeae8 *Meta/data.rds
50a9fa3e1aa2c47fa7bdbd6e6bb8974e *Meta/features.rds
4a64ccd09a00bbcddac9645c4cc6fb07 *Meta/hsearch.rds
246483b17defa0ad11243d29394a28a8 *Meta/links.rds
fb4058983abd4a96983c0a8895d2a134 *Meta/nsInfo.rds
83fb3a421b035217a39781a0c16b55a2 *Meta/package.rds
2ceec251543b91000b3b482c204048ea *Meta/vignette.rds
13164d11c5767f2e9b3208e54081984b *NAMESPACE
d906ab5e5130ec0c224cd729fadb4990 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/SmartPhos
180cac1fbdb7d8f096b626eb3adf70b2 *R/SmartPhos.rdb
8b44c1cc269a02c05a830155d0f261f6 *R/SmartPhos.rdx
a1d9e65bf23f124d5a5c5be7411875dc *README.md
bd1a0810eb5dc494bacf285a26cdc2b1 *data/Homo_sapien_kinase_substrate_network.rda
dc9d8be0657fefc2fa8c92a8362acffb *data/Mus_musculus_kinase_substrate_network.rda
68283a3654ae5c815a5e4d58c2542c6c *data/datalist
65d3517d81c2349575dd1128a7e0c64a *data/dda_example.rda
d2274385eb30c0ef47554f3b7c5e1686 *data/dia_example.rda
8356e2a21df92d291548452005e83d18 *data/swissProt.rda
bda1c464aec398ee9c6754bd5b71a636 *doc/SmartPhos.R
bfdf1079eac0b84a2077ad7ef445d99b *doc/SmartPhos.Rmd
aa5051cdd8b344d7589fac3785cc720d *doc/SmartPhos.html
38b11b8b871c9dbf3c695bf6c6733e32 *doc/SmartPhos_Shiny.R
d6a9d5a8f64260c49220179f5e98077b *doc/SmartPhos_Shiny.Rmd
8a4099fcded23666f3ea48dafda10ef6 *doc/SmartPhos_Shiny.html
7f8c0e4785f364a671d10acf0a064453 *doc/index.html
dc56317f37f68453a982de6eab7eb4a6 *extdata/phosDDA_1.xls
49119c8d26c997c1e3478c624512d0a6 *extdata/phosDIA_1.xls
bb6562bd5f8497149fe62b12a4c75705 *extdata/phosDIA_2.xls
3aa27f6ff18e57f335b05371d3da07b4 *extdata/proteomeDDA_1.xls
f083890c271770bfc2f05c58d53b8326 *extdata/proteomeDIA_1.xls
dcf0b8302a7babba6fb0b1e0580b4416 *extdata/proteomeDIA_2.xls
f9fb0d43598b220c69b7adbba603d4d6 *help/AnIndex
b54bb6692b522b4d108f064405c66b55 *help/SmartPhos.rdb
9e9aa4fedca38f8c6f4757756c5ac939 *help/SmartPhos.rdx
ab7a83f9088ced788aca8d8f92745377 *help/aliases.rds
e9594f9b8326237878f5b4b2ed01ff8e *help/paths.rds
c02ae78813dd4fe5a41a34e2e7931433 *html/00Index.html
ee41876c0116916bb04bcf4fe3e43d78 *html/R.css
68cb4ea844fa3ce7ed9b0fe99f24420a *scripts/extdata_generation.txt
04bdb4176df51a0730186a8784a733bb *shiny-app/geneset/Cancer_Hallmark.gmt
a7d3895c31f15d1d61d511ab7ecb663c *shiny-app/geneset/Chemical_and_Genetic_Perturbations.gmt
9d9d492a3f374b888819235f4801afa4 *shiny-app/geneset/GO_Biological_Processes.gmt
5445b9420795d4238a9e166cde3133a8 *shiny-app/geneset/KEGG_pathways.gmt
e10c7313a4977ab1016ee89dca648b14 *shiny-app/geneset/Oncogenic_signatures.gmt
e1198a4b675fdf729a68fc841dc2e889 *shiny-app/geneset/Transcription_factors.gmt
1e3abccadaf993fdb910ba1c8fdb997d *shiny-app/infoTable.tsv
a1d2e6d94afd4742af002444abe44fd2 *shiny-app/ptmset/human_PTM.rda
a6aab12cc1c21395ba4731125a1d5226 *shiny-app/server.R
7c837007162ac07bfc8f96d063269598 *shiny-app/ui.R
