Package: RcwlPipelines
Title: Bioinformatics pipelines based on Rcwl
Version: 1.28.0
Authors@R: 
    c(person(given = "Qiang", family = "Hu",
             role = c("aut", "cre"),
             email = "qiang.hu@roswellpark.org"),
      person(given = "Qian", family = "Liu",
             role = c("aut"),
             email = "qian.liu@roswellpark.org"),
      person(given = "Shuang", family = "Gao",
	     role = c("aut"),
	     email = "shuang.gao@roswellpark.org"))
Description: A collection of Bioinformatics tools and pipelines based
        on R and the Common Workflow Language.
Depends: R (>= 3.6), Rcwl, BiocFileCache
Imports: rappdirs, methods, utils, git2r, httr, S4Vectors
License: GPL-2
Encoding: UTF-8
Suggests: testthat, knitr, rmarkdown, BiocStyle
VignetteBuilder: knitr
RoxygenNote: 7.2.3
biocViews: Software, WorkflowStep, Alignment, Preprocessing,
        QualityControl, DNASeq, RNASeq, DataImport, ImmunoOncology
SystemRequirements: nodejs
Config/Bioconductor/UnsupportedPlatforms: windows
Config/pak/sysreqs: cmake libglpk-dev make libgit2-dev libicu-dev
        libpng-dev libssh2-1-dev libuv1-dev libxml2-dev libssl-dev
        python3 libx11-dev zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2026-04-28 12:49:45 UTC
RemoteUrl: https://github.com/bioc/RcwlPipelines
RemoteRef: RELEASE_3_23
RemoteSha: 01bab3cc8446560dca64bc08e4fc90a7af399909
NeedsCompilation: no
Packaged: 2026-04-30 06:06:33 UTC; root
Author: Qiang Hu [aut, cre],
  Qian Liu [aut],
  Shuang Gao [aut]
Maintainer: Qiang Hu <qiang.hu@roswellpark.org>
Built: R 4.6.0; ; 2026-04-30 06:08:19 UTC; windows
