Package: QTLExperiment
Type: Package
Date: 2025-10-27
Title: S4 classes for QTL summary statistics and metadata
Version: 2.4.0
Authors@R: c(
    person("Christina", "Del Azodi", role=c("aut"), email="cazodi@svi.edu.au"), 
    person("Davis","McCarthy", role=c("ctb"), email="dmccarthy@svi.edu.au"),
    person("Amelia","Dunstone", role=c("cre", "aut"), email="amelia.dunstone@svi.edu.au", comment=c(ORCID="0009-0009-6426-1529")))
License: GPL-3
URL: https://github.com/dunstone-a/QTLExperiment
BugReports: https://github.com/dunstone-a/QTLExperiment/issues
Encoding: UTF-8
Depends: SummarizedExperiment
Imports: methods, rlang, checkmate, dplyr, collapse, vroom, tidyr,
        tibble, utils, stats, ashr, S4Vectors, BiocGenerics
Suggests: testthat, BiocStyle, knitr, rmarkdown, covr
Description: QLTExperiment defines an S4 class for storing and
        manipulating summary statistics from QTL mapping experiments in
        one or more states. It is based on the 'SummarizedExperiment'
        class and contains functions for creating, merging, and
        subsetting objects. 'QTLExperiment' also stores experiment
        metadata and has checks in place to ensure that transformations
        apply correctly.
biocViews: FunctionalGenomics, DataImport, DataRepresentation,
        Infrastructure, Sequencing, SNP, Software
VignetteBuilder: knitr
RoxygenNote: 7.3.3
Config/pak/sysreqs: libicu-dev zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2026-04-28 13:01:55 UTC
RemoteUrl: https://github.com/bioc/QTLExperiment
RemoteRef: RELEASE_3_23
RemoteSha: 67c5ec866ae47ebae5aa71793a51da7a8b5c0b31
NeedsCompilation: no
Packaged: 2026-04-30 06:05:09 UTC; root
Author: Christina Del Azodi [aut],
  Davis McCarthy [ctb],
  Amelia Dunstone [cre, aut] (ORCID:
    <https://orcid.org/0009-0009-6426-1529>)
Maintainer: Amelia Dunstone <amelia.dunstone@svi.edu.au>
Built: R 4.6.0; ; 2026-04-30 06:07:33 UTC; windows
