DotPlot                 Dotplot of the enriched Gene Ontology terms
GOaGO                   Gene Ontology enrichment analysis in a set of
                        gene pairs
GOaGO-accessors         Accessors and show method for 'GOaGO-result'
                        objects
GOaGO-result-class      An S4 class to represent the results of GO-a-GO
                        enrichment analysis
RidgePlot               Ridgeplot of the sampling distributions for the
                        randomized gene pairs
annotateAnchors         Associate interaction anchors to the nearest
                        TSSes
annotateInteractions    Associate interactions to gene pairs
as.data.frame           Coerce a 'GOaGO-result' object to a data frame
convertTranscriptsToTSS
                        Convert gene transcripts to Transcription Start
                        Sites
genePairsGM12878        Gene pairs associated with chromatin loops in
                        GM12878 cell line
termGenePairs           Extract the enriched Gene Ontology terms along
                        with gene pairs sharing them
uniqueGenePairs         Extract unique gene pairs from the data frame
                        provided
