Package: ChIPXpress
Type: Package
Title: ChIPXpress: enhanced transcription factor target gene
        identification from ChIP-seq and ChIP-chip data using publicly
        available gene expression profiles
Version: 1.56.0
Date: 2012-12-09
Author: George Wu
Maintainer: George Wu <georgetwu@gmail.com>
Description: ChIPXpress takes as input predicted TF bound genes from
        ChIPx data and uses a corresponding database of gene expression
        profiles downloaded from NCBI GEO to rank the TF bound targets
        in order of which gene is most likely to be functional TF
        target.
License: GPL(>=2)
LazyLoad: yes
Imports: Biobase, GEOquery, frma, affy, bigmemory, biganalytics
Depends: R (>= 2.10), ChIPXpressData
Suggests: mouse4302frmavecs, mouse4302.db, mouse4302cdf, RUnit,
        BiocGenerics
Packaged: 2026-04-29 20:42:02 UTC; root
biocViews: ChIPchip, ChIPSeq
Config/pak/sysreqs: libicu-dev libxml2-dev libssl-dev libx11-dev
        zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2026-04-28 12:36:45 UTC
RemoteUrl: https://github.com/bioc/ChIPXpress
RemoteRef: RELEASE_3_23
RemoteSha: ca57a311858e84942651b3e9007ed48eb4324d6d
NeedsCompilation: no
Built: R 4.6.0; ; 2026-04-29 20:48:53 UTC; windows
