anchor_pair_enrich      Determine enriched motifs in anchors
anchor_pair_example_count
                        spatzie count correlation data set
anchor_pair_example_match
                        spatzie match association data set
anchor_pair_example_score
                        spatzie score correlation data set
compare_motif_pairs     Compare pairs of motifs between two interaction
                        datasets
compare_pairs_example   compare_motif_pairs example
filter_motifs           Filter motifs based on occurrence within
                        interaction data
filter_pair_motifs      Filter significant motif interactions
filter_pairs_example    spatzie score correlation filtered data set
find_ep_coenrichment    Find co-enriched motif pairs in
                        enhancer-promoter interactions
get_specific_interactions
                        Get interactions that contain a specific motif
                        pair
int_data_k562           K562 Enhancer - Promoter Interactions Data Set
int_data_mslcl          MSLCL Enhancer - Promoter Interactions Data Set
int_data_yy1            Mouse YY1 Enhancer - Promoter Interactions Data
                        Set
interactions_yy1        Mouse YY1 Enhancer - Promoter Interactions Data
                        Set
interactions_yy1_enhancer
                        Mouse YY1 Enhancer - Promoter Interactions Data
                        Set - YY1 enhancers
interactions_yy1_ep     Mouse YY1 Enhancer - Promoter Interactions Data
                        Set - YY1 enhancers/promoters
interactions_yy1_promoter
                        Mouse YY1 Enhancer - Promoter Interactions Data
                        Set - YY1 promoters
plot_motif_occurrence   Plot motif occurrence
scan_interactions_example
                        Interactions scanned for motifs -
                        interactionData object
scan_interactions_example_filtered
                        Interactions with motifs filtered for
                        significance - interactionData object
scan_motifs             Scans interaction file for motif instances
spatzie                 spatzie
