accessors	accessors
addModules	omXplore-modules
boxPlot	intensity-plots
BuildColorStyles	BuildColorStyles
buildGraph	pep_prot_CC
Build_enriched_qdata	Build_enriched_qdata
Build_X_CC	converters
Check_List_consistency	converters
Check_MSnSet_Consistency	converters
Check_se_Consistency	converters
Children	q_metadata
color-legend	color-legend
colorLegend	color-legend
colorLegend_server	color-legend
colorLegend_ui	color-legend
Compute_CC	converters
converters	converters
convert_to_mae	converters
corrMatrix	corrmatrix
corrmatrix	corrmatrix
customChart	customChart
custom_metacell_colors	color-legend
CVDist	plot-variance
density-plot	density-plot
densityPlot	density-plot
df_to_mae	converters
df_to_se	converters
display.CC.visNet	pep_prot_CC
ds-cc	ds-cc
ds-pca	ds-pca
ds-view	ds-view
ExtendPalette	palette
external_app	external_app
extFoo1	external_app
extFoo1_server	external_app
extFoo1_ui	external_app
extFoo2	external_app
extFoo2_server	external_app
extFoo2_ui	external_app
FormatDataForDT	FormatDataForDT
formatDT	format_DT
formatDT_server	format_DT
formatDT_ui	format_DT
format_DT	format_DT
GetCCInfos	pep_prot_CC
GetColorsForConditions	palette
GetMetacellTags	q_metadata
GetPkgVersion	GetPkgVersion
get_adjacencyMatrix	accessors
get_adjacencyMatrix,SummarizedExperiment-method	accessors
get_cc	accessors
get_cc,SummarizedExperiment-method	accessors
get_colID	accessors
get_colID,SummarizedExperiment-method	accessors
get_design	accessors
get_design,MultiAssayExperiment-method	accessors
get_group	accessors
get_group,MultiAssayExperiment-method	accessors
get_metacell	accessors
get_metacell,SummarizedExperiment-method	accessors
get_parentProtId	accessors
get_parentProtId,SummarizedExperiment-method	accessors
get_pkg_version	accessors
get_pkg_version,SummarizedExperiment-method	accessors
get_type	accessors
get_type,SummarizedExperiment-method	accessors
globals	globals
heatmapD	omXplore_heatmap
heatmapForMissingValues	omXplore_heatmap
intensity-plots	intensity-plots
is.listOf	is.listOf
listOfdf_to_mae	converters
listOfLists_to_mae	converters
listOfmatrix_to_mae	converters
listOfMSnSet_to_mae	converters
listOfSE_to_mae	converters
listPlotModules	omXplore-modules
listShinyApps	omXplore-modules
list_to_se	converters
MAE_Compatibility_with_Prostar_1x	Prostar-1x-compatible
MAE_to_mae	converters
matrix_to_mae	converters
matrix_to_se	converters
metacell.def	q_metadata
MSnSet_to_mae	converters
MSnSet_to_se	converters
mv.heatmap	omXplore_heatmap
my_PCA	ds-pca
omXplore-modules	omXplore-modules
omXplore_cc	ds-cc
omXplore_cc_server	ds-cc
omXplore_cc_ui	ds-cc
omXplore_corrmatrix	corrmatrix
omXplore_corrmatrix_server	corrmatrix
omXplore_corrmatrix_ui	corrmatrix
omXplore_density	density-plot
omXplore_density_server	density-plot
omXplore_density_ui	density-plot
omXplore_heatmap	omXplore_heatmap
omXplore_heatmap_server	omXplore_heatmap
omXplore_heatmap_ui	omXplore_heatmap
omXplore_intensity	intensity-plots
omXplore_intensity_server	intensity-plots
omXplore_intensity_ui	intensity-plots
omXplore_pca	ds-pca
omXplore_pca_server	ds-pca
omXplore_pca_ui	ds-pca
omXplore_tabExplorer	omXplore_tabExplorer
omXplore_tabExplorer_server	omXplore_tabExplorer
omXplore_tabExplorer_ui	omXplore_tabExplorer
omXplore_variance	plot-variance
omXplore_variance_server	plot-variance
omXplore_variance_ui	plot-variance
palette	palette
Parent	q_metadata
pep_prot_CC	pep_prot_CC
pkgs.require2	pkgs.require2
plot-variance	plot-variance
plotCCJitter	pep_prot_CC
plotPCA_Eigen	ds-pca
plotPCA_Eigen_hc	ds-pca
plotPCA_Ind	ds-pca
plotPCA_Var	ds-pca
plots_tracking	plots_tracking
plots_tracking_server	plots_tracking
plots_tracking_ui	plots_tracking
Prostar-1x-compatible	Prostar-1x-compatible
QFeatures_to_mae	converters
q_metadata	q_metadata
SampleColors	palette
SE_Compatibility_with_Prostar_1.x	Prostar-1x-compatible
SE_to_mae	converters
sub_R25	sub_R25
vdata	vdata
view_dataset	ds-view
view_dataset_server	ds-view
view_dataset_ui	ds-view
violinPlot	intensity-plots
wrapper_pca	ds-pca
