msa-package	msa-package
class:MsaAAMultipleAlignment	MsaMultipleAlignmentClasses
class:MsaDNAMultipleAlignment	MsaMultipleAlignmentClasses
class:MsaMetaData	MsaMetaData-class
class:MsaRNAMultipleAlignment	MsaMultipleAlignmentClasses
msa	msa
MsaAAMultipleAlignment	MsaMultipleAlignmentClasses
MsaAAMultipleAlignment-class	MsaMultipleAlignmentClasses
msaCheckNames	msaCheckNames
msaClustalOmega	msaClustalOmega
msaClustalW	msaClustalW
msaConsensusSequence	msaConsensusSequence-methods
msaConsensusSequence,matrix-method	msaConsensusSequence-methods
msaConsensusSequence,MultipleAlignment-method	msaConsensusSequence-methods
msaConservationScore	msaConservationScore-methods
msaConservationScore,matrix-method	msaConservationScore-methods
msaConservationScore,MultipleAlignment-method	msaConservationScore-methods
msaConvert	msaConvert
MsaDNAMultipleAlignment	MsaMultipleAlignmentClasses
MsaDNAMultipleAlignment-class	MsaMultipleAlignmentClasses
MsaMetaData	MsaMetaData-class
MsaMetaData-class	MsaMetaData-class
msaMuscle	msaMuscle
msaPackage	msa-package
msaPrettyPrint	msaPrettyPrint
MsaRNAMultipleAlignment	MsaMultipleAlignmentClasses
MsaRNAMultipleAlignment-class	MsaMultipleAlignmentClasses
params,MsaAAMultipleAlignment-method	MsaMultipleAlignmentClasses
params,MsaDNAMultipleAlignment-method	MsaMultipleAlignmentClasses
params,MsaMetaData-method	MsaMetaData-class
params,MsaRNAMultipleAlignment-method	MsaMultipleAlignmentClasses
print,MsaAAMultipleAlignment-method	MsaMultipleAlignmentClasses
print,MsaDNAMultipleAlignment-method	MsaMultipleAlignmentClasses
print,MsaRNAMultipleAlignment-method	MsaMultipleAlignmentClasses
show,MsaAAMultipleAlignment-method	MsaMultipleAlignmentClasses
show,MsaDNAMultipleAlignment-method	MsaMultipleAlignmentClasses
show,MsaRNAMultipleAlignment-method	MsaMultipleAlignmentClasses
version	MsaMetaData-class
version,MsaAAMultipleAlignment-method	MsaMultipleAlignmentClasses
version,MsaDNAMultipleAlignment-method	MsaMultipleAlignmentClasses
version,MsaMetaData-method	MsaMetaData-class
version,MsaRNAMultipleAlignment-method	MsaMultipleAlignmentClasses
