benchmark               Regress estimated cell type proportions against
                        the ground truth
bulkRNAseq_ABIS         PBMCs expression profiles (ABIS dataset)
correlate               Pearson correlation of cell type proportions
                        across cell types and methods
deconvolute             Deconvolution from bulk RNAseq
get_TPM                 Convert raw counts to TPM
get_decon_methods       Deconvolution methods acronyms
groundTruth_ABIS        PBMCS true cell type proprotions (ABIS dataset)
load_ABIS               Load demo PBMCs deconvolution data
plot_benchmark          Plot benchmarking analysis scores
plot_correlate          Plot of correlations between deconvolution
                        methods
plot_deconvolute        Estimated cell types across methods
plot_proportions        Plot estimated cell type proportions
plot_regress            Plot estimated cell type coefficients against
                        the ground truth
plot_similarity         Plot reference profile similariy matrix
sigMatrix_ABIS_S0       Signature matrix for deconvolution of PBMCs in
                        17 cell types
sigMatrix_ABIS_S1       Signature matrix for deconvolution of PBMCs in
                        13 cell types
sigMatrix_ABIS_S2       Signature matrix for deconvolution of PBMCs in
                        11 cell types
sigMatrix_ABIS_S3       Signature matrix for deconvolution of PBMCs in
                        9 cell types
