cellmigRation-package	cellmigRation-package
AddDimension	AddDimension
aggregateFR	aggregateFR
aggregateTrackedCells	aggregateTrackedCells
bpass	bpass
CellMig	CellMig-class
CellMig-class	CellMig-class
CellMigPCA	CellMigPCA
CellMigPCAclust	CellMigPCAclust
CellMigPCAclustALL	CellMigPCAclustALL
cellmigRation	cellmigRation-package
CellTracker	CellTracker
CellTrackerMainLoop	CellTrackerMainLoop
CentroidArray	CentroidArray
CentroidValidation	CentroidValidation
circshift	circshift
cntrd	cntrd
ComputeTracksStats	ComputeTracksStats
DetectRadii	DetectRadii
DiAutoCor	DiAutoCor
DiRatio	DiRatio
DiRatioPlot	DiRatioPlot
EstimateDiameterRange	EstimateDiameterRange
FianlizeOptiParams	FianlizeOptiParams
FilterTrackedCells	FilterTrackedCells
FinRes	FinRes
fixDA	fixDA
fixExpName	fixExpName
fixFM1	fixFM1
fixFM2	fixFM2
fixFM3	fixFM3
fixFM4	fixFM4
fixFM5	fixFM5
fixFM6	fixFM6
fixID1	fixID1
fixID2	fixID2
fixID3	fixID3
fixID4	fixID4
fixID5	fixID5
fixID6	fixID6
fixMSD	fixMSD
fixPER1	fixPER1
fixPER2	fixPER2
fixPER3	fixPER3
FMI	FMI
ForwardMigration	ForwardMigration
GenAllCombos	GenAllCombos
getAvailableAggrMetrics	getAvailableAggrMetrics
getCellImages	getCellImages
getCellImages,trackedCells-method	getCellImages
getCellMigSlot	getCellMigSlot
getCellMigSlot,CellMig,character-method	getCellMigSlot
getCellsMeta	getCellsMeta
getCellsStats	getCellsStats
getCellTrackMeta	getCellTrackMeta
getCellTrackMeta,trackedCells-method	getCellTrackMeta
getCellTracks	getCellTracks
getCellTracks,trackedCells-method	getCellTracks
getCellTrackStats	getCellTrackStats
getCellTrackStats,trackedCells-method	getCellTrackStats
getDACtable	getDACtable
getDiRatio	getDiRatio
getFMItable	getFMItable
getForMigtable	getForMigtable
getImageCentroids	getImageCentroids
getImageCentroids,trackedCells-method	getImageCentroids
getImageStacks	getImageStacks
getMSDtable	getMSDtable
getOptimizedParameters	getOptimizedParameters
getOptimizedParams	getOptimizedParams
getOptimizedParams,trackedCells-method	getOptimizedParams
getPerAndSpeed	getPerAndSpeed
getPopulationStats	getPopulationStats
getProcessedImages	getProcessedImages
getProcessedImages,trackedCells-method	getProcessedImages
getProcessingStatus	getProcessingStatus
getProcessingStatus,trackedCells-method	getProcessingStatus
getResults	getResults
getTracks	getTracks
getVACtable	getVACtable
initialize,CellMig-method	CellMig-class
initialize,trackedCells-method	trackedCells-class
initializeTrackParams	initializeTrackParams
innerBondRaster	innerBondRaster
internalPermutation	internalPermutation
LinearConv2	LinearConv2
LoadTiff	LoadTiff
MakeHypercube	MakeHypercube
matfix	matfix
MigrationStats	MigrationStats
MSD	MSD
NextOdd	NextOdd
NonParallel4OptimizeParams	NonParallel4OptimizeParams
NonParallelTrackLoop	NonParallelTrackLoop
nontrivialBondTracking	nontrivialBondTracking
OptimizeParams	OptimizeParams
OptimizeParamsMainLoop	OptimizeParamsMainLoop
Parallel4OptimizeParams	Parallel4OptimizeParams
ParallelTrackLoop	ParallelTrackLoop
PerAndSpeed	PerAndSpeed
pkfnd	pkfnd
plot3DAllTracks	plot3DAllTracks
plot3DTracks	plot3DTracks
plotAllTracks	plotAllTracks
plotSampleTracks	plotSampleTracks
PlotTracksSeparately	PlotTracksSeparately
PostProcessTracking	PostProcessTracking
Prep4OptimizeParams	Prep4OptimizeParams
preProcCellMig	preProcCellMig
rmPreProcessing	rmPreProcessing
runTrackingPermutation	runTrackingPermutation
setAnalyticParams	setAnalyticParams
setAnalyticParams,trackedCells,list-method	setAnalyticParams
setCellMigSlot	setCellMigSlot
setCellMigSlot,CellMig,character,ANY-method	setCellMigSlot
setCellMigSlot,CellMig,character-method	setCellMigSlot
setCellsMeta	setCellsMeta
setCellTracks	setCellTracks
setCellTracks,trackedCells,matrix-method	setCellTracks
setExpName	setExpName
setExpName,CellMig,character-method	setExpName
setOptimizedParams	setOptimizedParams
setOptimizedParams,trackedCells,ANY,ANY-method	setOptimizedParams
setOptimizedParams,trackedCells-method	setOptimizedParams
setProcessedImages	setProcessedImages
setProcessedImages,trackedCells,list-method	setProcessedImages
setProcessingStatus	setProcessingStatus
setProcessingStatus,trackedCells,character,numeric-method	setProcessingStatus
setTrackedCellsMeta	setTrackedCellsMeta
setTrackedCellsMeta,trackedCells,list-method	setTrackedCellsMeta
setTrackedCentroids	setTrackedCentroids
setTrackedCentroids,trackedCells,list-method	setTrackedCentroids
setTrackedPositions	setTrackedPositions
setTrackedPositions,trackedCells,data.frame-method	setTrackedPositions
setTrackingStats	setTrackingStats
setTrackingStats,trackedCells,ANY,ANY-method	setTrackingStats
setTrackingStats,trackedCells-method	setTrackingStats
sinkAway	sinkAway
subNetworkTracking	subNetworkTracking
ThreeConditions	ThreeConditions
track	track
TrackCellsDataset	TrackCellsDataset
trackedCells	trackedCells-class
trackedCells-class	trackedCells-class
trackHypercubeBuild	trackHypercubeBuild
trackSlideProcessing	trackSlideProcessing
trackSlideWrapUp	trackSlideWrapUp
TrajectoryDataset	TrajectoryDataset
trivialBondRaster	trivialBondRaster
trivialBondTracking	trivialBondTracking
ValidateTrackingArgs	ValidateTrackingArgs
VeAutoCor	VeAutoCor
visualizeCellTracks	visualizeCellTracks
VisualizeCntr	VisualizeCntr
VisualizeImg	VisualizeImg
VisualizeStackCentroids	VisualizeStackCentroids
visualizeTrcks	visualizeTrcks
warnMessage	warnMessage
WSADataset	WSADataset
wsaPreProcessing	wsaPreProcessing
