82dd64a02a131a6fbe14b7ee60db6fb9 *CITATION
f13954d7a285a1d59b7954ed9c328d43 *DESCRIPTION
ac7b29bad15b4f5b19562c34d885a0e5 *INDEX
da7288ba02580904f107b666360c34a3 *Meta/Rd.rds
74beb1203ce5872f4cc35fc132febf25 *Meta/data.rds
97f39cfa069205fc947ab1e51ea53d4e *Meta/features.rds
c37c80909c3561aca43d0ab83964a068 *Meta/hsearch.rds
224669a7af84f6b103614a897e9a5d12 *Meta/links.rds
7f31dfc09b6138d83966a4d5b9f559b1 *Meta/nsInfo.rds
8220539ffdc56ef6df83331227de0d6b *Meta/package.rds
a41678b7e3d2e1229d2b4bee802dac01 *Meta/vignette.rds
86cd0b6e13d5c2d93423f5cb59f7d0c7 *NAMESPACE
f32d7b1cf13bcc0e0986678db02fc166 *NEWS.rd
d6c68f1fe41ced6e98a766a3757313da *R/MSstatsPTM
b79255a580e9b1b411f583aa647fce2d *R/MSstatsPTM.rdb
bccec7c1ac448d924d80d760fe838732 *R/MSstatsPTM.rdx
21802e016bfee5c5243a64e947349e09 *data/Rdata.rdb
37aa24b4162da16a4086525568098470 *data/Rdata.rds
6b085bc0eeebfedb5c32434a18f1e18e *data/Rdata.rdx
2dd8f4370aee6c8bb3169a78788ec968 *doc/MSstatsPTM_LabelFree_Workflow.R
630c66a77c8bcf2941f3380760712ad8 *doc/MSstatsPTM_LabelFree_Workflow.Rmd
1172b355ad8333d6853ea9497cbe817e *doc/MSstatsPTM_LabelFree_Workflow.html
040485b1076807485a0a214844004b28 *doc/MSstatsPTM_TMT_Workflow.R
5aae19c87ee7c6b2e6224841b684c59b *doc/MSstatsPTM_TMT_Workflow.Rmd
f0380deeead594239ffd0a671820c864 *doc/MSstatsPTM_TMT_Workflow.html
ad3e42a4344fda9758e2e686a24fafd0 *doc/index.html
ef9d05deedb9b779c780712c81e19eba *extdata/O13297.fasta
bf319d8bcce43f2f6f8d8574747bc271 *extdata/diann.fasta
03a627bbe7678e8470693d7a482ed8ac *extdata/maxq_lf_fasta.fasta
e0b43db2fe12100747a3b7ce079543e8 *extdata/maxq_tmt_fasta.fasta
1846d9ecb1c8c9b160dc6a11da78dd8e *extdata/metamorpheus_fasta.fasta
d076e1b47eb4230a0fbcbe6e309a3ab2 *extdata/pd_fasta.fasta
1ee93cb9a7ad1a6e2b4ac88fa0179f4b *extdata/pd_with_proteome.fasta
f990f48387c98b9842f72fa8768c1326 *extdata/spectronaut_fasta.fasta
b85d426bd69c2cff896fa9a404bac8d7 *help/AnIndex
8902244a92105a26397d31336d5e6beb *help/MSstatsPTM.rdb
dfe41dd2f4a0429a8ec03d51c2c9863e *help/MSstatsPTM.rdx
ec321458ba75d9f43474f41cbcedd1df *help/aliases.rds
37e5feef3df0441ec7507e0ed56574a5 *help/paths.rds
46117e02d054d1827d7cddf913d55866 *html/00Index.html
8b9362669af13540a86a3ac6cf22f99d *html/R.css
f223a5ec4069445f20d7a3be0631269e *libs/x64/MSstatsPTM.dll
f036040745ab4ca3810f060599ae3bb1 *tinytest/raw_data/DIANN/annot.csv
fc498f940fcc0b7e5af41d7c56bb5d1f *tinytest/raw_data/DIANN/report.tsv
687bdf011108bf5d7a9dea1f24cd5dba *tinytest/raw_data/Fragpipe/MSstats.csv
86386dc3c7fb9823968919a01f5407bc *tinytest/raw_data/Fragpipe/experiment_annotation.tsv
d71d8136a58413b67a8ae42dc04362e8 *tinytest/raw_data/Metamorpheus/AllQuantifiedPeaks.tsv
39cb0ead7dba8f5fe3ba927afdbecf0b *tinytest/raw_data/Metamorpheus/AllQuantifiedPeaksGlobalProteome.tsv
630ed4124f8d5f3c0d350cbd45305797 *tinytest/raw_data/Metamorpheus/ExperimentalDesign.tsv
06f3d7ebd519175d838867cb218ca509 *tinytest/raw_data/Metamorpheus/ExperimentalDesignGlobalProteome.tsv
93475a25005eb82e3b8a169cf4fc2a37 *tinytest/raw_data/PD/pd-ptm-annot.csv
24bd96285718ddbbd9c45da82c08d93e *tinytest/raw_data/PD/pd-ptm-input.csv
a75f7a58efa8057549e10c9030390d5e *tinytest/raw_data/PD/protein-annot.csv
a12b262ad649f437801a848d4de27cb3 *tinytest/raw_data/PD/protein-input.csv
72dbecb8583a31b038f69e5e5e9ca387 *tinytest/raw_data/Progenesis/phospho_annotation.csv
d51294f6d14daa6850e44f2d5508e3a4 *tinytest/raw_data/Progenesis/progenesis_peptide.csv
62b318642fa249fad6d1acabd2adc65d *tinytest/raw_data/ProteinProspector/Annotation.csv
ac4681835dd87871c2f136f5e33ae40c *tinytest/raw_data/ProteinProspector/Prospector_PhosphoTMT.txt
b8c1678489e7fa6c86d8dd181a65300d *tinytest/test_converters.R
e9655fb8a33d0583f47254404f2f5878 *tinytest/test_dataSummarizationPTM.R
7512662de5a1c4c5a69c5ca7e790b335 *tinytest/test_dataSummarizationPTM_TMT.R
3f56b0f201739f3cdb0136c73a5bd361 *tinytest/test_groupComparisonPTM.R
