areaEnrich	areaEnrich
associateEvents	associateEvents
checkGeneMap	checkGeneMap
checkList	checkList
checkMAE	checkMAE
checkPathways	checkPathways
clusterRange	clusterRange
clusterReliability	clusterReliability
cnvScoreStouffer	cnvScoreStouffer
conditionalModel	conditionalModel
conditionalP	conditionalP
empiricalP	empiricalP
example.gbm.mae	example.gbm.mae
fitCurvePercent	fitCurvePercent
gbm.pathways	gbm.pathways
gene.map	gene.map
genomicPlotSmall	genomicPlotSmall
getCoverage	getCoverage
getDataFrame	getDataFrame
getDiggitEmpiricalQvalues	getDiggitEmpiricalQvalues
getEmpiricalQvals	getEmpiricalQvals
getPvalsMatrix	getPvalsMatrix
getSubtypeEventTables	getSubtypeEventTables
integrateFunction	integrateFunction
integrateTZ	integrateTZ
makeCoverageDf	makeCoverageDf
makeSaturationPlots	makeSaturationPlots
mapEntrez	mapEntrez
mapHugo	mapHugo
mapScoresCnvBand	mapScoresCnvBand
mergeData	mergeData
mergeDataBySubtype	mergeDataBySubtype
mergeGenomicSaturation	mergeGenomicSaturation
mergeLists	mergeLists
Moma	Moma-class
Moma-class	Moma-class
MomaConstructor	momaConstructor
mutSig	mutSig
oncoprintPlot	oncoprintPlot
pathwayDiggitIntersect	pathwayDiggitIntersect
plotEvents	plotEvents
rea	rea
reaNULL	reaNULL
sampleNameFilter	sampleNameFilter
sampleOverlap	sampleOverlap
sigInteractorsDIGGIT	sigInteractorsDIGGIT
sREA	sREA
stoufferIntegrate	stoufferIntegrate
stoufferIntegrateDiggit	stoufferIntegrateDiggit
subsetListInteractions	subsetListInteractions
validDiggitInteractions	validDiggitInteractions
viperGetSigTFS	viperGetSigTFS
viperGetTFScores	viperGetTFScores
