$,MatrixList-method	MatrixList-class
coefficients,dmDSfit-method	dmDSfit-class
colnames,MatrixList-method	MatrixList-class
colnames<-,MatrixList-method	MatrixList-class
common_precision	dmDSprecision-class
common_precision,dmDSprecision-method	dmDSprecision-class
common_precision,dmSQTLprecision-method	dmSQTLprecision-class
common_precision<-	dmDSprecision-class
common_precision<-,dmDSprecision-method	dmDSprecision-class
counts,dmDSdata-method	dmDSdata-class
counts,dmSQTLdata-method	dmSQTLdata-class
design,dmDSfit-method	dmDSfit-class
design,dmDSprecision-method	dmDSprecision-class
design,dmDStest-method	dmDStest-class
dim,MatrixList-method	MatrixList-class
dmDSdata	dmDSdata
dmDSdata-class	dmDSdata-class
dmDSfit-class	dmDSfit-class
dmDSprecision-class	dmDSprecision-class
dmDStest-class	dmDStest-class
dmFilter	dmFilter
dmFilter,dmDSdata-method	dmFilter
dmFilter,dmSQTLdata-method	dmFilter
dmFit	dmFit
dmFit,dmDSprecision-method	dmFit
dmFit,dmSQTLprecision-method	dmFit
dmPrecision	dmPrecision
dmPrecision,dmDSdata-method	dmPrecision
dmPrecision,dmSQTLdata-method	dmPrecision
dmSQTLdata	dmSQTLdata
dmSQTLdata-class	dmSQTLdata-class
dmSQTLfit-class	dmSQTLfit-class
dmSQTLprecision-class	dmSQTLprecision-class
dmSQTLtest-class	dmSQTLtest-class
dmTest	dmTest
dmTest,dmDSfit-method	dmTest
dmTest,dmSQTLfit-method	dmTest
dm_plotDataDSInfo	dm_plotDataDSInfo
dm_plotProportions	dm_plotProportions
elementNROWS,MatrixList-method	MatrixList-class
genewise_precision	dmDSprecision-class
genewise_precision,dmDSprecision-method	dmDSprecision-class
genewise_precision,dmSQTLprecision-method	dmSQTLprecision-class
genewise_precision<-	dmDSprecision-class
genewise_precision<-,dmDSprecision-method	dmDSprecision-class
length,dmDSdata-method	dmDSdata-class
length,dmSQTLdata-method	dmSQTLdata-class
length,MatrixList-method	MatrixList-class
MatrixList-class	MatrixList-class
mean_expression	dmDSprecision-class
mean_expression,dmDSprecision-method	dmDSprecision-class
mean_expression,dmSQTLprecision-method	dmSQTLprecision-class
names,dmDSdata-method	dmDSdata-class
names,dmSQTLdata-method	dmSQTLdata-class
names,MatrixList-method	MatrixList-class
names<-,MatrixList-method	MatrixList-class
ncol,MatrixList-method	MatrixList-class
nrow,MatrixList-method	MatrixList-class
plotData	plotData
plotData,dmDSdata-method	plotData
plotData,dmSQTLdata-method	plotData
plotPrecision	plotPrecision
plotPrecision,dmDSprecision-method	plotPrecision
plotPrecision,dmSQTLprecision-method	plotPrecision
plotProportions	plotProportions
plotProportions,dmDSfit-method	plotProportions
plotProportions,dmSQTLfit-method	plotProportions
plotPValues	plotPValues
plotPValues,dmDStest-method	plotPValues
plotPValues,dmSQTLtest-method	plotPValues
proportions	dmDSfit-class
proportions,dmDSfit-method	dmDSfit-class
results	dmDStest-class
results,dmDStest-method	dmDStest-class
results,dmSQTLtest-method	dmSQTLtest-class
rownames,MatrixList-method	MatrixList-class
rownames<-,MatrixList-method	MatrixList-class
samples	dmDSdata-class
samples,dmDSdata-method	dmDSdata-class
samples,dmSQTLdata-method	dmSQTLdata-class
[,dmDSdata,ANY-method	dmDSdata-class
[,dmDSdata-method	dmDSdata-class
[,dmSQTLdata,ANY-method	dmSQTLdata-class
[,dmSQTLdata-method	dmSQTLdata-class
[,MatrixList,ANY-method	MatrixList-class
[,MatrixList-method	MatrixList-class
[[,MatrixList-method	MatrixList-class
