712958127df063c0070fbe0ef3be6cbd *DESCRIPTION
809b7aa1abc408e856a61ba48cbde436 *NAMESPACE
e178b5736d95d0a8dc5f2337e8bfa860 *R/annotation.R
fcf4c989707c3bc3d79e19cb96ed3970 *R/assign_pseudotime_bins.R
d7a423ea33275a194c9336ea288f7f4a *R/blase_data_class.R
1077c3103f3c9bd71d1efe48503c4a7f *R/blase_data_conversion.R
16c0d3e31759700a372b89bc7c16f9f0 *R/data.R
4a2c89bd1ef0b9dd2ba2e24d7c0fb532 *R/gene_selection.R
b88c966abb94e1e4a764539a476833dc *R/mapping.R
e4deabcd24a23d667ffda8dd340098ea *R/mapping_result_class.R
ff13f03c3f98f4bf897e234405a13131 *R/mapping_result_plotting.R
f30e2bed41146fc780c93e54acf1f9d1 *R/plot_theme.R
fa8ac0080bba7ee04366ad0aa55d60ea *R/tuning.R
47a13d84735131cd4bd66e131833bbd7 *R/util.R
85be745866e85e14e332055ac179187a *README.md
51797eba68112e8afebfe4aea7d3cb13 *build/vignette.rds
3529cc5a489e0152c50a3520bf3a26eb *data/MCA_PF_SCE.rda
d158729e1c467e99a94d5197ce00dbb7 *data/datalist
0fdb807dc43c2d6a013834a3bb1e78af *data/painter_microarray.rda
c48556f613e4ec2026fab12a7cf14021 *data/tradeSeq_BLASE_example_sce.rda
03edb46db7e94e8d5dc03c45514f6bd7 *data/zhang_2021_heat_shock_bulk.rda
3cdc13f939b6ee534afa9cdedb0b0107 *inst/CITATION
af76ba31b4b1d68c9337093221e7cfdb *inst/NEWS.md
e39e143fb6105091b7f066856420f69c *inst/_pkgdown.yml
c63d41f6becad42172621c69f2c702e5 *inst/doc/BLASE-for-annotating-scRNA-seq.R
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59a5729464f65e3ae9d768b2b73ba86c *man/BlaseData-class.Rd
b8223b4d8c0a4b6bf010f9319b9b4b2e *man/MCA_PF_SCE.Rd
b76c41c4e1ad9205ca04b57d0c042142 *man/MappingResult.Rd
48f56e06b5a3c3dbcb56bc3b73302ac7 *man/PRIVATE_.ci.Rd
f3178d830fa47ff331f2b30ba5313b7c *man/PRIVATE_correlation.ci.Rd
519eae416a438acacce543802f1f71e2 *man/PRIVATE_cosine_similarity.ci.Rd
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6c1512dcbe9d54140278d541ce0fc3e9 *man/annotate_sce.Rd
48784062631e4ab3bedb0febcdbe4c8b *man/as.BlaseData.Rd
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9f53c8c1c0e4ca117ae14a73fadf4039 *man/bins-getter.Rd
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0c74d55a4c865294549d8926082070ca *man/genes-setter.Rd
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3c8c34a6fce0053305c57ea9ffbe7edf *man/get_top_n_genes.Rd
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539222ecf8b0112fad10f5a822f3012c *man/map_best_bin.Rd
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3bf5071803fee43e793b1fbc0a3feaa0 *man/mapping-result-history-getter.Rd
2712ee92a399609e4bb22cef0b62a818 *man/mapping-result-metric-getter.Rd
0b509cf3e3653fc1f4359a019ca384e8 *man/mapping-result-strong-mapping-getter.Rd
d5a78af87095356553cf47e7ed5bd314 *man/mapping-result-top-2-distance-getter.Rd
53cb0fad796fa03089963de2fb59cf2b *man/painter_microarray.Rd
a2aa6420f7fe07d692a1d9d2ec56ce5e *man/plot_bin_population.Rd
7e7e38799e4c3443628ebf7c9bb6cda8 *man/plot_find_best_params_results.Rd
39514ad11404c49238a83c2a237b57af *man/plot_gene_peakedness.Rd
bd70ab1e4f6dca7927c10d7dbb5e963b *man/plot_mapping_result.Rd
fd865f15f728901c3bf2ad150fa4dec8 *man/plot_mapping_result_corr.Rd
3d207abc23573f2a69bae8e385edec2b *man/plot_mapping_result_heatmap.Rd
c00b6e32f46cdc2ebdeba0cc81577a28 *man/pseudobulk-bins-getter.Rd
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04a4cdcb9e191047aa0db3a8edf12751 *man/show_blase_object.Rd
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5f65d78f91cfaa44cfe0881b4ed22c9f *man/tradeSeq_BLASE_example_sce.Rd
1de413bcef23d084c004640c76b7b17c *man/zhang_2021_heat_shock_bulk.Rd
245d219e14121cd005746be12d383937 *tests/testthat.R
88fff8f0551ad0e9c0d55bf25388ab55 *tests/testthat/helper.R
cfb56ec95c09f50f14745d1f5aebc25d *tests/testthat/test-annotation.R
1aac0666c56ec47d7db39150cd7005ce *tests/testthat/test-assign_pseudotime_bins.R
824deb94e658c58bfd72516c15da4967 *tests/testthat/test-blase_data_class.R
8fbeaa08401acf34141474bfee929e95 *tests/testthat/test-blase_data_conversion.R
6d309cdeff4cb8a996526f93982e1dd7 *tests/testthat/test-gene_selection.R
e63ceedaa6986e46ee6eaeaf31808675 *tests/testthat/test-mapping.R
e8ec03dcca8b52dce4d1f5c43002b962 *tests/testthat/test-mapping_result_class.R
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4018a5637ed3aa83bdcfed475d8036b9 *tests/testthat/test-util.R
8f97c3019c4030cc7e75f2dfcdae929a *vignettes/BLASE-for-annotating-scRNA-seq.Rmd
3c38b04875c5740de1f72fcc166fb5fc *vignettes/BLASE-for-excluding-developmental-genes-from-bulk-RNA-seq.Rmd
cb2d54344c63eacd04a1db31ad5d5bd7 *vignettes/assign-bulk-to-pseudotime.Rmd
