2fe0f4435985e60d932053e83ad44586 *DESCRIPTION
da7e1bddf4f3893eb9cf7dfe0d8ec226 *NAMESPACE
9b663c57a1fa49b5acc26471fe157dfd *NEWS
5692736b58b24ca183ef206c5c6634f9 *R/AllClasses.R
817360798ad5ef1a0563842c2bef4d56 *R/AllGenerics.R
50530b98b2caea630e48500715af0a29 *R/GSVA-package.R
59574ae6e07d16e21f7b02a200a68ac6 *R/GSVA-pkg-defunct.R
18db387789f75bbdcd66672324a13416 *R/GSVA-pkg-deprecated.R
e94ac698da0430e377168950fa5356bc *R/GsvaMethodParam.R
525182cfec8c9cba6c5ea22c3fdace33 *R/block_processing.R
6796f7b7a6db7118ef86b2dfa0dcdb11 *R/genesets.R
6176264f82cb9446dada6cfb04e58e0d *R/gsva-global.R
f09f0eeb805e296efcfe2525db5822ce *R/gsva.R
796dca3812ecea87b60dc88637c3627d *R/gsvaRanks_serialization.R
b9dc820b43f9202894fb997cad429d32 *R/methods-ShinyApp.R
0b3f77da9c43fe7fcb516378651d2bf7 *R/plage.R
e22b2b84c5750551093f48cf58a320aa *R/spatial.R
49c537ba0a952eb79d4fbede46602595 *R/ssgsea.R
24c321debb23a73da57f9598ab462b86 *R/utils.R
a1007429aa695f4b26a014d9f61d96fc *R/zscore.R
9c6efd7ddf2d97709f75552290099051 *R/zzz.R
37a7cdb041349afae7062bd64f253e21 *README.md
533839446f70bde34a1050627ce80586 *build/partial.rdb
1fd8d57459a61b2adf9082c3ab62d8f8 *build/vignette.rds
453d5f90bd6225b9bbf8fa9b9dd1e516 *cleanup
f1b7a918db657cba60304eb978b2450f *inst/CITATION
482c7bfa6e0cdbe02ffc00a6e33e1082 *inst/doc/GSVA.R
3a63b0e93ad22b4240e9eff12e0d3bc8 *inst/doc/GSVA.Rmd
fd3eba7f3e82e0e204ba24f34a6028a2 *inst/doc/GSVA.html
1c547c137ce5a502cceb05acbf17ea8a *inst/doc/GSVA_proteomics.R
10aca52ac38900d99ff1873d7fb6dfa5 *inst/doc/GSVA_proteomics.Rmd
3a7e304b2b1d87aa6257a615cddb2c71 *inst/doc/GSVA_proteomics.html
7666213049c2387a37f2cb76d89410d9 *inst/doc/GSVA_scRNAseq.R
755b5f90373ba748b8cf08f80af7b5c7 *inst/doc/GSVA_scRNAseq.Rmd
453facf918aae62a48bf64bae6f41718 *inst/doc/GSVA_scRNAseq.html
73eb8309279720edb362e967238efd1c *inst/scripts/spatial_data_for_example_code.R
bf968c2f1b5abd82360ced0ad33aae9e *inst/shinyApp/argumentsDataModule.R
25e2b694159c4e7d07f774614d9a3c58 *inst/shinyApp/closeModule.R
dc214dc088b1cd01628804b5296afb06 *inst/shinyApp/downloadModule.R
9cdb81086c4211775369cd3474d469e8 *inst/shinyApp/geneSetsModule.R
2c65b8e76c0322d7ed8ee293f2c898ec *inst/shinyApp/global.R
864045a809dcb3b5279972f874e20318 *inst/shinyApp/matrixModule.R
15da683e3de9cbf03c45be58a0de0d41 *inst/shinyApp/modalGSVAModule.R
d767155a0a53077a837552b5a9537ce8 *inst/shinyApp/plot1_Module.R
56a93a0297bd15075a35e940e6718571 *inst/shinyApp/plot2_Module.R
7fb0745614ce1f6818ae24101df1f571 *inst/shinyApp/plot3_Module.R
b651b3e5eb4ace75f5358a3d900c8057 *inst/shinyApp/server.R
bed624bd4a37319dce3c5d3351299803 *inst/shinyApp/ui.R
c6fd28f6180768396f84bf00f43a644f *inst/shinyApp/www/GSVA.png
871bcb8b39094743ba2792a9e8f0017c *inst/shinyApp/www/style.css
dc1cbc4f4ba93a73928c74e5c8855138 *inst/unitTests/test_genesets.R
5d3557dde52a07a3e8622c51fe223076 *inst/unitTests/test_gsvaCcode.R
3be8384350cf4810e3df9a9d2066243c *inst/unitTests/test_gsvaRanks.R
fc75ad9dbb5420350552861df341c4de *inst/unitTests/test_inputdatacontainers.R
59ddeab021749abccd528cecc3cd60f6 *inst/unitTests/test_mainAPI.R
b87dce851b3b8aa7af18130d3efee043 *inst/unitTests/test_navalues.R
a2e2cd06e4d45e79e06233240a705f73 *inst/unitTests/test_ondisk.R
03f7475515f0ff131bc2a91a596f50e9 *inst/unitTests/test_parallel.R
e1353a33259c9cbd3c25604466b93c74 *inst/unitTests/test_params.R
24c2eaa1485613f7c635ab6bed9ffc9d *inst/unitTests/test_ranksserialization.R
94258044d7257d2019ab0397e424eb29 *inst/unitTests/test_sparse.R
5971527d8d0dad5929fddcaa6f288132 *inst/unitTests/test_spatial.R
9775e961ead52fbedfcc2aa117c2f888 *inst/unitTests/test_ssgsea.R
dccd81e67deece23e396e51881156eb5 *man/GSVA-pkg-defunct.Rd
3d0d25909987fa708c944470179e4766 *man/GSVA-pkg-deprecated.Rd
0b542b84540a8fd4b6d72f85ba7b3bb7 *man/GsvaExprData-class.Rd
92ea07497bde8581dfd1b4100ae90377 *man/GsvaGeneSets-class.Rd
30277d3cadd11d7bec7d80e90120ae15 *man/GsvaMethodParam-class.Rd
f0b589edea0ec231ac4ce63263707a7f *man/computeGeneSetsOverlap.Rd
68ae87f81564dbddbf1e69b5999a8d65 *man/deduplicateGeneSets.Rd
7e46d890bd243147c0b792340742cde2 *man/filterGeneSets.Rd
4f569477cc47dbdcbfe378fdf1c648bf *man/geneIdsToGeneSetCollection.Rd
53cd2c3b5ce8c425df9151de3798e5ad *man/geneSets.Rd
3c9281beaba85e50f4c0fe0fd5f4eebd *man/gsva.Rd
be7dd94dddcd5d0599291a65ae024892 *man/gsvaAnnotation.Rd
87d4eeff0a682d7ede2a9ab256f225c6 *man/gsvaEnrichment.Rd
acee7721ab8a5bda10e90283ac4440e6 *man/gsvaParam-class.Rd
25688c81b6b18062258ffdb893060ae4 *man/gsvaRanks.Rd
00293c9ac543783b78afc4ec0d5f9e68 *man/gsvaRanks_serialization.Rd
e16143e4afa84c18f4d96e25091f8c69 *man/guessGeneIdType.Rd
c3d8987b5e4eaf2530fb956cd80e4b0a *man/igsva.Rd
b21e88c72eed34cf14c2384ffda983d5 *man/plageParam-class.Rd
80f36344827c81405833759736906271 *man/readGMT.Rd
2b128356de2eeb9acc22aae5d87c13f1 *man/spatCor.Rd
33d3cf22cf97f5fd790e34d92983628a *man/ssgseaParam-class.Rd
b002cb45e514fdc9be056b1bed14faf9 *man/zscoreParam-class.Rd
d7a0d33542989d75126998823ef89850 *src/ecdfvals.c
a2eaa6dbecb734ee0452daa6a1ac5732 *src/kcdfvals.c
c090d834965cac8eeae3c320fe681f6b *src/kernel_estimation.c
8d3fe1eb30324c041858cb2cbba8b1a9 *src/ks_test.c
35fb6df6e691169232f8b1c5a11e5522 *src/register_cmethods.c
2b9a63035e8455c379929d64261c3f52 *src/row_rngs_nzrngs.c
863a03890777b26074b76da2e983892a *src/utils.c
f2310c7773e0506a7998fe8de54969ac *tests/runTests.R
0f0b2b311b69698b52532c4cbf123b15 *tests/test_gsva_newapi.R
8c29672b60d2f44b17bb143e0be9ed20 *tests/test_gsva_newapi.Rout.save
1acc9a45221e1755a3561b5e56b2495e *tests/test_plage_newapi.R
758da4dc726ec788f89f741aad811027 *tests/test_plage_newapi.Rout.save
f9e8c5538f10663ad3b18cfbc7055b71 *tests/test_ssgsea_newapi.R
19da3a1db67ab043c5ffa5f8ba84e2b0 *tests/test_ssgsea_newapi.Rout.save
558b265dc798838662e1e214a3155035 *tests/test_zscore_newapi.R
17ef6b670e8c0334f9c456df21991b7a *tests/test_zscore_newapi.Rout.save
3a63b0e93ad22b4240e9eff12e0d3bc8 *vignettes/GSVA.Rmd
2c6010cc74749bf01d7b351307dbca35 *vignettes/GSVA.bib
10aca52ac38900d99ff1873d7fb6dfa5 *vignettes/GSVA_proteomics.Rmd
755b5f90373ba748b8cf08f80af7b5c7 *vignettes/GSVA_scRNAseq.Rmd
7f8eb02c3a715cc27c9e6954bd8d3b38 *vignettes/methods.png
a407c8f86caaae0ecbe41d26a3e88319 *vignettes/webapp1.png
93e0a4fffed5119c01f62a4751d13f03 *vignettes/webapp2.png
