11d7f72a8aca48b8619c11e653b9f465 *DESCRIPTION
f4eda51018051de136d3b3742e9a7a40 *LICENSE.md
378728542a93882baa2343eeaa9b7857 *NAMESPACE
b9a9425ec8a30b0977fb5fa9fa555ad2 *NEWS.md
4c43405205ec276dd4f3e0ed1733af66 *R/CellMentor-package.R
68dd4d1eeab5d98967b581fe8190efa2 *R/Datasets.R
420862bc266c938fc25d9714f45dba45 *R/GridSearch.R
806180b6a59e505710f7014ead775fbc *R/InitializeWH.R
8343cd22e69dfd0feefde83cb49a58ae *R/SelectRank.R
56fcf60562895d4181eb0d08c6c056c6 *R/accessors.R
7ac3bdba09c8eba5a1bdf8b24bf7d077 *R/classes.R
42154acce0ef8a80a0356f65ad19e427 *R/create_object.R
e51c068dbcfd85992dc216ed72d1954d *R/data-toy.R
2cbf1af2af451b71df337b00e917473b *R/helper_functions.R
fb1b54b769c1d78125650de19280b88a *R/optimization_functions.R
bb6e7ba7f105774459779af746a60ab2 *R/preprocessing.R
6eb37a5073c08041dcd86cbb8022a2db *R/run_csfnmf.R
b0f040dc884df80ceca0ae15ba3df7a2 *R/scaling.R
e8c63effa41ed05db36b20c732cac2d8 *R/train_functions.R
6b47b939408ff0c79dab0942bfc03c78 *R/utils.R
bb678907aa0c17d1aeb357a4db461a7a *README.md
533839446f70bde34a1050627ce80586 *build/partial.rdb
36229b055bdec8adde5caef5367418aa *build/vignette.rds
a1bce192f238c7e3811c4fcb1d697a91 *data-raw/Zheng10x_Immune+Jurkat.rda
f9c84dd07d542051b7bad9eedf4acbb4 *data-raw/nohup.out
33c6b05a61a1d6c7d473f0061d647588 *data-raw/pbmcsca.R
2d17a7a5861da4f41112bcc5a9e236d0 *data-raw/pbmcsca_raw.rda
a409acbfa72bef296ac22a75f2c4b65e *data-raw/pbmcsca_raw.rds
15ed6eb83d25c6d489b0011ae6dd8393 *data-raw/zheng_data.R
5287335465e781d4a738d6272c98bc67 *data/obj_toy.rda
0e87a33751e9addcbaf766709a439c03 *data/qry_matrix_toy.rda
66647b666e6b87651944ef14eab234f2 *data/ref_celltype_toy.rda
fa34f6c274f44e966141af8586ae2db8 *data/ref_matrix_toy.rda
2419a2e45769a5bedea5d36e44c67be7 *inst/doc/CellMentor_vignette.R
e90721112576a0d39069bff9f82d0d15 *inst/doc/CellMentor_vignette.Rmd
827607a0c6ef7a68236278c556d22536 *inst/doc/CellMentor_vignette.html
f6bc2ba08dd0b107a73616f8637c7ec7 *man/CellMentor.Rd
bb13269575167c08a6344ea5613ad4a5 *man/CreateCSFNMFobject.Rd
45c26d96743cf6ea2262e12b03580762 *man/H.Rd
16dc20245f0a154eec9ef1ec96e8eda6 *man/W.Rd
8d5bf00d33344a996a2bdeea4bb6ebe6 *man/cm_annotation.Rd
db2a7e03d774a5fb702463453616636b *man/cm_rank.Rd
192426209b7ea32a84a6e27efeb19cfe *man/data_matrix.Rd
2d82d8d59ee7ffbbef36defa2180df32 *man/h.baron_dataset.Rd
4872572216180b80be9dd33d6506a78e *man/hBaronDataset.Rd
bc3eb4a11688a46a063da367f334d907 *man/matrices.Rd
104cd0be9a1568294b3d0c4318b5ce6d *man/muraro_dataset.Rd
28e2326a6c8392400c74a270b5af5c9b *man/obj_toy.Rd
713b4c76155af3384418bd350824b11c *man/project_data.Rd
cef616fce841e1eb7d90966283997d4c *man/ref_matrix.Rd
56a8e8b0e10eab2cbed04fe73082758a *man/ref_matrix_toy.Rd
e9d075981f608e0aa5f538140792cc47 *tests/testthat.R
ba072eb7afb42fd6189bfc0de55eb708 *tests/testthat/helper-test-data.R
c1bbc03490c5c520d54a6a77373d4792 *tests/testthat/test-CellMentor.R
12ea2f63a739f64d5a1d30d6ac7008ec *tests/testthat/test-CreateCSFNMFobject.R
ee9078ea86e105e7f0af54a24f181e33 *tests/testthat/test-SelectRank.R
8ef7a575e6d7f6d71479878fc1191d3e *tests/testthat/test-data-loading.R
7b4c60553b0e73da64e82d6035b34efc *tests/testthat/test-initialization.R
5049046a599cfe4c6134e681b96dd916 *tests/testthat/test-integration.R
fa699a3c69f4eafbee1fe07d431594ba *tests/testthat/test-project_data.R
f0a9ac4e8f33917134790f20b4502219 *tests/testthat/test-utils.R
e90721112576a0d39069bff9f82d0d15 *vignettes/CellMentor_vignette.Rmd
